Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CYP3A51P-201ENST00000633513 256 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 AP000553.6-201ENST00000641242 118 ntBASIC3.78□□□□□ -1.8
PCDH9Q9HC56 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH9Q9HC56 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 GABPAP-201ENST00000419271 1356 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 RNA5SP42-201ENST00000364278 115 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 RNVU1-3-201ENST00000364313 161 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 SNORD82-201ENST00000365530 70 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 RPL31P1-201ENST00000398116 372 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AL138880.1-201ENST00000405824 642 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC006366.1-201ENST00000422002 759 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 RPL23AP74-201ENST00000437246 471 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 MTND5P14-201ENST00000441481 1267 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 PAXBP1P1-201ENST00000449315 447 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AL445669.2-201ENST00000454425 421 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC078817.1-201ENST00000492623 435 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC090453.1-201ENST00000495560 436 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC108043.1-201ENST00000512696 574 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC022447.1-201ENST00000515358 464 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC022861.1-201ENST00000522981 663 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 MIR5187-201ENST00000583479 76 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AL020997.2-201ENST00000602607 184 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 BBIP1P1-201ENST00000602999 279 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC007566.2-201ENST00000603642 413 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AL513477.2-201ENST00000607858 568 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC090425.2-201ENST00000608818 501 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC027807.2-201ENST00000616099 408 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC009318.4-201ENST00000620496 486 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 AC092656.1-203ENST00000624134 423 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 NMD3P1-201ENST00000439704 1488 ntBASIC3.77□□□□□ -1.81
PCDH9Q9HC56 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH9Q9HC56 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 GDI2P1-201ENST00000429312 1336 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 Y_RNA.126-201ENST00000363382 111 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 OR5H15-201ENST00000383696 930 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 HMGB1P17-201ENST00000403495 628 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AL445189.1-201ENST00000405722 338 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 RN7SKP159-201ENST00000410657 292 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 TPMTP2-201ENST00000414372 726 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 FNDC3CP-201ENST00000420795 1155 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 GLRXP1-201ENST00000423261 334 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC092017.2-201ENST00000427600 362 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 MTCO1P27-201ENST00000448269 226 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC091564.1-201ENST00000464563 479 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 PABPC1P3-201ENST00000469174 459 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 PCBP2P3-201ENST00000509726 843 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC116347.2-201ENST00000514912 523 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC025881.1-201ENST00000518851 512 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AP004247.1-201ENST00000531556 1289 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AP004242.1-201ENST00000533701 349 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms