Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 PCMTD1P2-201ENST00000565017 355 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 XIAPP1-201ENST00000603162 600 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC012669.1-201ENST00000603209 283 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC006254.3-201ENST00000603353 884 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL160281.1-201ENST00000605307 311 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC097468.3-201ENST00000607956 456 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL590282.1-201ENST00000610379 1136 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC015967.1-201ENST00000619893 476 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC022079.1-201ENST00000621546 602 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL357559.1-201ENST00000622228 274 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC244205.2-202ENST00000635781 342 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AC006504.1-201ENST00000562493 3666 ntBASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
POLR1BQ9H9Y6 AL645937.1-201ENST00000641739 1652 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 USP8P1-201ENST00000494673 3183 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 RNY4P24-201ENST00000362735 96 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-97P-201ENST00000363387 104 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 U8.11-201ENST00000384699 133 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 U8.12-201ENST00000384701 133 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 MIR491-201ENST00000384877 84 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 RPL21P17-201ENST00000397467 475 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 BEND7P1-201ENST00000422058 457 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AL358472.1-201ENST00000431295 329 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 RSU1P2-202ENST00000437884 485 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 MTATP6P26-201ENST00000445926 662 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AP000542.1-201ENST00000448473 371 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 U8.18-201ENST00000459285 133 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC106872.2-201ENST00000494303 480 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-759P-201ENST00000516740 103 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 SNORA70.24-201ENST00000517233 118 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC103783.1-201ENST00000520506 373 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 SETP2-201ENST00000553886 926 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 GNRHR2P1-201ENST00000555315 631 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC007687.1-201ENST00000602704 304 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 Z99497.2-201ENST00000603634 310 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 MTCYBP22-201ENST00000603788 447 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC011451.2-201ENST00000604303 598 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AL034351.1-201ENST00000605288 668 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC002550.2-201ENST00000621246 394 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AF246928.1-201ENST00000623768 87 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 MIR3974-201ENST00000637126 96 ntBASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
POLR1BQ9H9Y6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 GABPAP-201ENST00000419271 1356 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 SNORD35B-201ENST00000363660 87 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 RNA5SP72-201ENST00000364442 117 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-660P-201ENST00000364566 109 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 SNORD3H-201ENST00000384486 214 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 RNU2-47P-201ENST00000410649 186 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 PGBD4P8-201ENST00000412993 562 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC068533.1-201ENST00000418542 415 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC010285.1-201ENST00000470580 392 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms