Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RPL23AP11-201ENST00000475260 469 ntBASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 SNORA31.1-201ENST00000515993 133 ntBASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 SNORA31.5-201ENST00000516190 133 ntBASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 AC107871.2-201ENST00000612894 502 ntBASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 MIR6733-201ENST00000635723 61 ntBASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 MIR4496-201ENST00000635896 61 ntBASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDH11XQ9BZA7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 API5P2-201ENST00000397055 1498 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 RNU6-543P-201ENST00000362576 108 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 SNORD114-1-201ENST00000362705 72 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AL079342.1-201ENST00000401460 267 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AL137014.1-201ENST00000420490 1226 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 MTCO2P17-201ENST00000424336 677 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 HMGN2P3-201ENST00000433603 273 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 HMGN2P5-201ENST00000436882 273 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 MTCO1P18-201ENST00000455518 1419 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 RPL23AP49-201ENST00000492925 468 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AC078918.1-201ENST00000498515 228 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 RNU4-60P-201ENST00000517239 135 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AC083923.1-201ENST00000523708 376 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 MTND2P26-201ENST00000528255 1029 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AL731537.2-201ENST00000561565 951 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 DEFB122-202ENST00000569013 197 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AC078899.3-201ENST00000599065 212 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 BDH2P1-201ENST00000602288 736 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AL133393.1-201ENST00000603277 287 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AL627309.6-201ENST00000606857 840 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AC006065.5-201ENST00000623427 349 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 LRRC77P-213ENST00000637727 880 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 MTND4P21-201ENST00000453886 1357 ntBASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PCDH11XQ9BZA7 AP006437.1-201ENST00000641440 3685 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RNU1-91P-201ENST00000364746 163 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RNU6-1293P-201ENST00000384077 107 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RNU6-253P-201ENST00000384730 105 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AL162578.1-201ENST00000406202 378 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RPL23AP47-201ENST00000408017 460 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 SNORD88.1-201ENST00000408684 91 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RPL31P2-201ENST00000413849 377 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AL691517.1-201ENST00000440833 1235 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 IFNA11P-201ENST00000446352 526 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RPS26P21-201ENST00000475397 348 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RPL9P6-201ENST00000492764 598 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AL024509.2-201ENST00000493462 493 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC026464.5-201ENST00000562497 722 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 OR4H6P-202ENST00000603819 340 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 RNU6-156P-201ENST00000621869 107 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 SEC63P2-201ENST00000503863 1939 ntBASIC3.1□□□□□ -1.91
PCDH11XQ9BZA7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms