Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AL353796.1-201ENST00000561542 3241 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 EXOC5P1-201ENST00000510543 1969 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AC016583.1-201ENST00000624221 2431 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 KCNMB3P1-202ENST00000493696 3389 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 AP001284.1-201ENST00000528393 2118 ntBASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP4-3Q9BYR4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 LINC00561-201ENST00000565815 2738 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AL161912.4-201ENST00000623889 2468 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AL359091.1-201ENST00000449048 1734 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC092692.1-201ENST00000623625 2595 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 MIR375-201ENST00000362103 64 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNA5SP333-201ENST00000363466 118 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-777P-201ENST00000364265 104 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNA5SP334-201ENST00000364825 118 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-1180P-201ENST00000364935 107 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-409P-201ENST00000384114 104 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-356P-201ENST00000384140 107 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-514P-201ENST00000384208 107 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-937P-201ENST00000384325 106 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-1113P-201ENST00000384348 107 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL7P60-201ENST00000397636 735 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AL079342.1-201ENST00000401460 267 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 DUTP5-201ENST00000406790 469 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 Y_RNA.592-201ENST00000410274 109 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC116036.1-201ENST00000412199 367 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 TMEM167AP1-201ENST00000423409 219 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 OR2AH1P-201ENST00000425717 928 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC024067.1-201ENST00000426199 223 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC099677.3-201ENST00000427081 395 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL21P40-201ENST00000428586 483 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 GAPDHP58-201ENST00000438477 1006 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC073909.1-201ENST00000447112 999 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 COX6CP18-201ENST00000448769 222 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AL445665.1-202ENST00000452436 324 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL18AP17-201ENST00000455326 198 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 NXT1P1-201ENST00000458481 316 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL21P11-201ENST00000461458 483 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AL122020.1-201ENST00000472287 459 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL21P93-201ENST00000480465 489 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 RN7SL629P-201ENST00000489622 285 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC083795.1-201ENST00000491760 320 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC138866.2-201ENST00000508650 584 ntBASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-3Q9BYR4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms