Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTFDC1Q9BY42 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.77□□□□□ -1.65
RTFDC1Q9BY42 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.77□□□□□ -1.65
RTFDC1Q9BY42 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTFDC1Q9BY42 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTFDC1Q9BY42 MARK2P15-201ENST00000432204 2186 ntBASIC4.77□□□□□ -1.65
RTFDC1Q9BY42 AC009902.3-201ENST00000606235 2172 ntBASIC4.77□□□□□ -1.65
RTFDC1Q9BY42 MTCO1P9-201ENST00000505577 1534 ntBASIC4.77□□□□□ -1.65
RTFDC1Q9BY42 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC092435.4-201ENST00000623012 4159 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 Y_RNA.194-201ENST00000363985 102 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 RNU6-335P-201ENST00000364563 113 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 MIR199A2-201ENST00000385289 110 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 HDGFP1-201ENST00000405943 252 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 RPL23AP48-201ENST00000406913 488 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 RNU6-712P-201ENST00000410558 100 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AL159987.2-201ENST00000432754 307 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 Z74696.2-201ENST00000436514 498 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AL353706.1-201ENST00000436728 494 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC091862.1-201ENST00000438016 1100 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AL590365.1-201ENST00000450788 243 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 MTND1P27-201ENST00000451117 902 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC099563.1-201ENST00000456086 418 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 BTF3P5-201ENST00000457252 467 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 MTCO1P42-201ENST00000457379 726 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 CBX3P3-201ENST00000508108 532 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC104619.4-201ENST00000510773 249 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC074250.1-201ENST00000511117 192 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 Y_RNA.655-201ENST00000515919 96 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 SNORA70.24-201ENST00000517233 118 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC018630.1-201ENST00000541376 925 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC006362.1-201ENST00000567392 174 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 MIR5697-201ENST00000578045 78 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 U3.45-201ENST00000607547 219 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC122108.2-201ENST00000611946 526 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AL442067.2-201ENST00000614033 363 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AL359715.5-201ENST00000623431 443 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 AC092125.1-201ENST00000562568 1995 ntBASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTFDC1Q9BY42 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AL583834.1-201ENST00000406943 343 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 HMGN1P14-201ENST00000412459 517 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 MTND1P28-201ENST00000435623 950 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC104308.1-201ENST00000454621 333 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 RPL7P24-201ENST00000493052 752 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 ARL2BPP4-201ENST00000506854 471 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 VWA8P1-201ENST00000510889 176 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC021146.3-201ENST00000511911 260 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 RNU6-1095P-201ENST00000516148 108 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 Vault.1-201ENST00000516474 102 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 RNU6-201P-201ENST00000517100 61 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 HMGN1P28-201ENST00000521340 364 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AL121603.1-201ENST00000553815 142 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 MIR3611-201ENST00000584484 83 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC119751.7-201ENST00000600494 245 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AL031666.3-201ENST00000609320 1006 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC109347.2-201ENST00000610220 349 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC138749.5-201ENST00000611461 208 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AC116165.2-201ENST00000616705 206 ntBASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.75□□□□□ -1.65
RTFDC1Q9BY42 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AL133412.1-201ENST00000380194 2992 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms