Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNVU1-3-201ENST00000364313 161 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 SNORD51-201ENST00000384320 80 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 RNU6-83P-201ENST00000384568 112 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 MIR591-201ENST00000385290 95 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 SNORD67-201ENST00000390833 111 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AL357075.1-201ENST00000404107 726 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 PSMA6P3-201ENST00000428242 164 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 ATP5F1P1-201ENST00000433775 569 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 Z80107.1-201ENST00000436830 412 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC009969.1-201ENST00000438726 172 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 CR769776.1-201ENST00000441254 787 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 SNORD11.1-201ENST00000459482 85 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 RPL21P41-201ENST00000459863 264 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 NCOR1P1-202ENST00000486162 291 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC090453.1-201ENST00000495560 436 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 WBP1LP4-201ENST00000505043 344 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 MRPS36P3-201ENST00000519284 130 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 NBEAP1-201ENST00000554452 979 ntBASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HDHD3Q9BSH5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC008264.2-201ENST00000610193 3731 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 OR1S2-201ENST00000302592 978 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 RNU1-33P-201ENST00000364249 162 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 RNU6-343P-201ENST00000364709 104 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 RPL23AP29-201ENST00000397284 453 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC025750.1-201ENST00000399891 379 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AL121972.1-201ENST00000402023 252 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 RNU6-712P-201ENST00000410558 100 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 NIPA2P1-201ENST00000426223 976 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AL590103.1-201ENST00000434488 307 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC244505.4-201ENST00000434905 287 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 FGF7P5-201ENST00000441829 291 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 SSXP5-201ENST00000443473 287 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 ELOCP13-201ENST00000443934 329 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 RPL7P15-201ENST00000461190 712 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 RPS4XP13-201ENST00000483219 789 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 RPL23AP55-201ENST00000498163 452 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 SNORA31.20-201ENST00000517111 133 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 RPL12P22-201ENST00000519073 490 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 SYF2P1-201ENST00000550658 413 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC006130.2-201ENST00000586202 326 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 VN1R78P-201ENST00000597393 564 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC131235.4-201ENST00000609288 620 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 AC004009.2-201ENST00000623016 728 ntBASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms