Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC135721.1-201ENST00000497954 479 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 DSTNP2-201ENST00000504533 515 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC006499.5-201ENST00000505037 514 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC109464.2-201ENST00000510242 943 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 GMPSP1-201ENST00000514075 579 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC106038.2-201ENST00000520706 568 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC091489.2-201ENST00000566263 604 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC009101.1-201ENST00000568135 242 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC135628.1-201ENST00000568867 534 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC025627.2-201ENST00000576220 160 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 MIR3160-1-201ENST00000577972 85 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 MIR3915-201ENST00000578518 97 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC004908.2-201ENST00000609090 574 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 OR10AB1P-201ENST00000609613 938 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 MIR6868-201ENST00000611215 58 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC024941.1-201ENST00000612250 334 ntBASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HERPUD2Q9BSE4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RNU6-809P-201ENST00000384461 107 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 MIR493-201ENST00000385254 89 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RN7SKP263-201ENST00000411194 309 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RN7SKP53-201ENST00000411337 315 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RPL7P8-201ENST00000411964 730 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC087650.1-201ENST00000431445 468 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RPL22P17-201ENST00000438729 315 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AF228730.2-201ENST00000438784 848 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC083863.1-201ENST00000438811 231 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AL356535.1-201ENST00000440335 398 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC097262.1-201ENST00000452559 548 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 KATNBL1P6-201ENST00000453433 915 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 MTND2P24-201ENST00000453434 806 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RPS3AP43-201ENST00000479743 781 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RPL23AP41-201ENST00000484754 458 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC069499.1-201ENST00000489433 509 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AF131216.2-201ENST00000512316 564 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 SNORA31.22-201ENST00000517204 135 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC092851.1-201ENST00000535964 478 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 OR4T1P-201ENST00000554933 911 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC011260.1-201ENST00000578420 472 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AL591034.3-201ENST00000605511 685 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AL390240.1-201ENST00000612950 384 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC093838.1-201ENST00000613014 469 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 ZYXP1-201ENST00000617638 118 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 UBE3AP2-201ENST00000429033 2259 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AC002546.1-201ENST00000588041 2504 ntBASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.14□□□□□ -1.75
HERPUD2Q9BSE4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 BDP1P-201ENST00000582658 1990 ntBASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 RNU5F-6P-201ENST00000362979 116 ntBASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 MTCYBP36-201ENST00000404146 440 ntBASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 RNA5SP317-201ENST00000410176 116 ntBASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 RNA5SP311-201ENST00000411290 116 ntBASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 UBE2D3P2-201ENST00000424409 445 ntBASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 AC008850.1-201ENST00000427546 362 ntBASIC4.13□□□□□ -1.75
HERPUD2Q9BSE4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms