Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM56Q9BRZ2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-593P-201ENST00000364716 112 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 SNORD115-7-201ENST00000365306 82 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 MIR1178-201ENST00000408396 91 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC009310.1-201ENST00000414414 451 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 FABP7P2-201ENST00000429946 379 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC020550.1-201ENST00000447385 163 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC010655.1-201ENST00000449336 292 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC104634.1-201ENST00000452720 462 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 MTCO3P10-201ENST00000455912 772 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 ENPP7P11-201ENST00000505915 627 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC079140.5-201ENST00000507882 310 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-64P-201ENST00000517119 105 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC103783.1-201ENST00000520506 373 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 NRBF2P4-201ENST00000520874 850 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 MIR5583-1-201ENST00000580941 59 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 MIR1273E-201ENST00000581165 102 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 RN7SL356P-201ENST00000582228 248 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 MIR4505-201ENST00000582238 73 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 MIR3672-201ENST00000584290 82 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC006363.1-201ENST00000603806 463 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC012409.4-201ENST00000612923 249 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC098657.3-201ENST00000620434 263 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 CYP4F35P-202ENST00000636121 390 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AC090971.4-201ENST00000560291 1800 ntBASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM56Q9BRZ2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AL137003.2-201ENST00000606924 2538 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 EXOC5P1-201ENST00000510543 1969 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 Y_RNA.135-201ENST00000363439 95 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC019155.1-201ENST00000382242 574 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-1040P-201ENST00000383974 107 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 RNA5SP107-201ENST00000411358 122 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 OR2AT2P-201ENST00000413438 905 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 RPL7P10-201ENST00000417407 739 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 SKA2P1-201ENST00000425592 390 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AL163193.1-201ENST00000444895 788 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AP000797.2-201ENST00000475768 606 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 RPL7P43-201ENST00000478876 753 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC004453.1-201ENST00000487895 408 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC135721.1-201ENST00000497954 479 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 MTND4LP22-201ENST00000508209 276 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 OR10G5P-201ENST00000532733 358 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AL049779.2-201ENST00000553847 315 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC008269.2-201ENST00000561915 1105 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 SUMO2P15-201ENST00000604285 278 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 AC005014.2-201ENST00000607795 599 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 MIR6839-201ENST00000620425 113 ntBASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms