Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 DEFB109C-201ENST00000382575 264 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 DEFB109B-201ENST00000382656 264 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4□□□□□ -1.77
SDF4Q9BRK5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4□□□□□ -1.77
SDF4Q9BRK5 BEND7P1-201ENST00000422058 457 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 MTCO2P17-201ENST00000424336 677 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 MTND5P14-201ENST00000441481 1267 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4□□□□□ -1.77
SDF4Q9BRK5 RSL24D1P3-201ENST00000449255 495 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4□□□□□ -1.77
SDF4Q9BRK5 BX322784.1-201ENST00000455793 1077 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 RN7SL594P-201ENST00000470590 287 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4□□□□□ -1.77
SDF4Q9BRK5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4□□□□□ -1.77
SDF4Q9BRK5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 SNORA31.8-201ENST00000516327 108 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SDF4Q9BRK5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4□□□□□ -1.77
SDF4Q9BRK5 SNRPGP16-201ENST00000533275 226 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 AC011602.1-201ENST00000546484 331 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 NACA-211ENST00000548563 827 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4□□□□□ -1.77
SDF4Q9BRK5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4□□□□□ -1.77
SDF4Q9BRK5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4□□□□□ -1.77
SDF4Q9BRK5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4□□□□□ -1.77
SDF4Q9BRK5 ACTR3BP1-201ENST00000605584 1247 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 U4.6-201ENST00000621618 127 ntBASIC4□□□□□ -1.77
SDF4Q9BRK5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SDF4Q9BRK5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDF4Q9BRK5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4□□□□□ -1.77
SDF4Q9BRK5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 SGO1P2-201ENST00000429458 1589 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 MTCO2P21-201ENST00000419780 677 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AL159169.1-201ENST00000421119 127 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AL159987.2-201ENST00000432754 307 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 RBMY2UP-201ENST00000453474 324 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AC023598.1-201ENST00000472521 361 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AP000563.1-201ENST00000490865 758 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 SNORA70.19-201ENST00000516717 90 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 FAM60BP-201ENST00000578364 658 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AL353997.4-201ENST00000586196 166 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 SRGNP1-201ENST00000603392 451 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 AL596327.1-201ENST00000603629 213 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 ELOCP35-201ENST00000604289 336 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.99□□□□□ -1.77
SDF4Q9BRK5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.99□□□□□ -1.77
SDF4Q9BRK5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AL049781.1-201ENST00000623195 3585 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 SNORD113-6-201ENST00000363345 75 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 SNORD6-201ENST00000365444 73 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 MIR34B-201ENST00000385076 84 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AL136372.1-201ENST00000403060 228 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AL008987.1-201ENST00000415528 237 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 TXNL1P1-201ENST00000429528 554 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 ATP5JP1-201ENST00000431631 322 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 SNRPEP7-201ENST00000438350 220 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC002381.1-201ENST00000447049 280 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC010401.1-201ENST00000463867 348 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms