Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC091826.1-201ENST00000514065 313 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXC2Q99958 AP003066.2-201ENST00000529375 555 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
FOXC2Q99958 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXC2Q99958 TGIF1P1-201ENST00000558095 802 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXC2Q99958 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
FOXC2Q99958 MTCO3P24-201ENST00000572729 782 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXC2Q99958 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXC2Q99958 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.72□□□□□ -1.97
FOXC2Q99958 AC009220.3-201ENST00000604318 586 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AP003973.1-201ENST00000604639 691 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AC008962.1-201ENST00000605729 304 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AC016877.3-201ENST00000606778 504 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AC008759.3-201ENST00000613300 508 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AL450472.3-201ENST00000615578 367 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
FOXC2Q99958 AC078880.5-201ENST00000617845 421 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.72□□□□□ -1.97
FOXC2Q99958 AL353748.2-201ENST00000622148 471 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.72□□□□□ -1.97
FOXC2Q99958 IGHVIII-44-202ENST00000636235 289 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AC090897.3-201ENST00000636973 1157 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 MIR622-201ENST00000638396 96 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 AC139713.2-210ENST00000641741 992 ntBASIC2.72□□□□□ -1.97
FOXC2Q99958 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
FOXC2Q99958 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
FOXC2Q99958 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
FOXC2Q99958 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
FOXC2Q99958 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.72□□□□□ -1.97
FOXC2Q99958 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
FOXC2Q99958 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
FOXC2Q99958 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
FOXC2Q99958 AC073073.2-201ENST00000609827 2578 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AC090740.1-201ENST00000623193 2262 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
FOXC2Q99958 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
FOXC2Q99958 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
FOXC2Q99958 RNU6-468P-201ENST00000384003 109 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 RNU1-101P-201ENST00000391171 127 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AC016769.3-201ENST00000396562 315 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 U3.42-201ENST00000408746 214 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.71□□□□□ -1.98
FOXC2Q99958 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXC2Q99958 AC012065.2-201ENST00000421295 375 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 TRIAP1P1-201ENST00000427062 225 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 MTCYBP15-201ENST00000433123 1127 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 MTCO1P48-201ENST00000448024 1096 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 HMGB3P8-201ENST00000449709 577 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 ELOCP23-201ENST00000452014 332 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 RPL12P26-201ENST00000452430 487 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 RPL23AP67-201ENST00000465341 474 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AC087312.1-201ENST00000471411 480 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 RPS17P11-201ENST00000474297 293 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.71□□□□□ -1.98
FOXC2Q99958 RNU5A-7P-201ENST00000515979 116 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 SNORA31.1-201ENST00000515993 133 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 SNORA31.5-201ENST00000516190 133 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 RNA5SP367-201ENST00000516557 118 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AC093331.1-201ENST00000521474 169 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AP003102.1-201ENST00000525638 661 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 AC005476.1-201ENST00000554427 397 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.71□□□□□ -1.98
FOXC2Q99958 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXC2Q99958 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.71□□□□□ -1.98
FOXC2Q99958 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.71□□□□□ -1.98
FOXC2Q99958 AC067852.3-201ENST00000589177 561 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 MTATP6P2-201ENST00000603319 678 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXC2Q99958 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 AL136370.1-201ENST00000608166 691 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 CYCSP41-201ENST00000616920 296 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AC002076.2-201ENST00000617362 122 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 AC006111.3-201ENST00000622137 383 ntBASIC2.71□□□□□ -1.98
FOXC2Q99958 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.71□□□□□ -1.98
FOXC2Q99958 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.71□□□□□ -1.98
FOXC2Q99958 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXC2Q99958 ZNF542P-204ENST00000482727 1305 ntBASIC2.7□□□□□ -1.98
FOXC2Q99958 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
FOXC2Q99958 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
FOXC2Q99958 RNU4-82P-201ENST00000362443 140 ntBASIC2.7□□□□□ -1.98
FOXC2Q99958 SNORD51-201ENST00000384320 80 ntBASIC2.7□□□□□ -1.98
FOXC2Q99958 RNA5SP184-201ENST00000411071 108 ntBASIC2.7□□□□□ -1.98
FOXC2Q99958 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.7□□□□□ -1.98
FOXC2Q99958 RPS15AP38-201ENST00000413110 372 ntBASIC2.7□□□□□ -1.98
FOXC2Q99958 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
FOXC2Q99958 EEF1A1P41-201ENST00000414667 207 ntBASIC2.7□□□□□ -1.98
FOXC2Q99958 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.7□□□□□ -1.98
FOXC2Q99958 RAC1P8-201ENST00000427086 527 ntBASIC2.7□□□□□ -1.98
FOXC2Q99958 MTCYBP32-201ENST00000427945 1084 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms