Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP4Q99569 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 AL020997.2-201ENST00000602607 184 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AL606490.9-201ENST00000603331 271 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AL596327.1-201ENST00000603629 213 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC067959.1-201ENST00000604334 379 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC069304.2-201ENST00000605154 435 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC090186.1-201ENST00000605991 572 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AL590282.1-201ENST00000610379 1136 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP4Q99569 MIR6875-201ENST00000617506 72 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
PKP4Q99569 AC018816.2-201ENST00000621460 353 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC079228.1-201ENST00000624774 1049 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 AC068724.3-201ENST00000625906 87 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP4Q99569 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP4Q99569 PABPC1P9-201ENST00000426076 1612 ntBASIC3.79□□□□□ -1.8
PKP4Q99569 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP4Q99569 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP4Q99569 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKP4Q99569 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP4Q99569 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PKP4Q99569 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP4Q99569 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 AL365440.1-201ENST00000436135 2167 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 RNU6-213P-201ENST00000384051 104 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 RNU6-1122P-201ENST00000384449 107 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 AC007066.1-201ENST00000392902 381 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 Y_RNA.604-201ENST00000410574 102 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 RNU2-71P-201ENST00000411395 189 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP4Q99569 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP4Q99569 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 TOMM22P1-201ENST00000418578 312 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 FNDC3CP-201ENST00000420795 1155 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 AC010975.2-201ENST00000427781 588 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 AL512649.1-201ENST00000428997 581 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 AL365184.2-201ENST00000431139 435 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 BMS1P19-201ENST00000433925 393 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 VDAC1P3-201ENST00000434069 851 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP4Q99569 AL031667.1-201ENST00000440222 725 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP4Q99569 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP4Q99569 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP4Q99569 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP4Q99569 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP4Q99569 AC007537.2-201ENST00000472093 511 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP4Q99569 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 MTND2P33-201ENST00000506452 1031 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP4Q99569 MTCYBP43-201ENST00000513621 740 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 RN7SKP21-201ENST00000516503 220 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 RN7SKP244-201ENST00000516513 307 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP4Q99569 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP4Q99569 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP4Q99569 AC016957.1-201ENST00000534895 309 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PKP4Q99569 OR8R1P-201ENST00000543943 764 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.78□□□□□ -1.8
PKP4Q99569 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP4Q99569 AC012065.4-201ENST00000602445 679 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 RNU6-88P-201ENST00000606801 100 ntBASIC3.78□□□□□ -1.8
PKP4Q99569 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PKP4Q99569 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP4Q99569 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP4Q99569 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP4Q99569 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PKP4Q99569 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP4Q99569 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP4Q99569 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP4Q99569 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP4Q99569 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP4Q99569 RNU5F-7P-201ENST00000363696 115 ntBASIC3.77□□□□□ -1.81
PKP4Q99569 RNU6-263P-201ENST00000363811 107 ntBASIC3.77□□□□□ -1.81
PKP4Q99569 RNA5SP97-201ENST00000365006 84 ntBASIC3.77□□□□□ -1.81
PKP4Q99569 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP4Q99569 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.77□□□□□ -1.81
PKP4Q99569 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP4Q99569 RNU6-629P-201ENST00000384061 103 ntBASIC3.77□□□□□ -1.81
PKP4Q99569 RNU6-821P-201ENST00000390995 107 ntBASIC3.77□□□□□ -1.81
PKP4Q99569 PTMAP5-201ENST00000393073 333 ntBASIC3.77□□□□□ -1.81
PKP4Q99569 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.77□□□□□ -1.81
PKP4Q99569 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.77□□□□□ -1.81
PKP4Q99569 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP4Q99569 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PKP4Q99569 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.77□□□□□ -1.81
PKP4Q99569 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP4Q99569 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms