Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MTCO3P1-205ENST00000422088 832 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 B3GNT2P1-201ENST00000434960 952 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC092045.1-201ENST00000495716 1231 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 MTATP6P22-201ENST00000507369 598 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 MRPS33P3-201ENST00000513456 322 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC245166.1-201ENST00000521012 253 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC007834.2-201ENST00000536310 343 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 OSBPL9P5-201ENST00000542581 171 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC007424.1-203ENST00000554613 687 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC084757.1-201ENST00000559987 490 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AL031281.1-201ENST00000604049 488 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC009220.3-201ENST00000604318 586 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AL033523.1-201ENST00000605153 153 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC005000.2-201ENST00000605468 310 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC018638.7-201ENST00000605836 1114 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC091946.2-201ENST00000606105 291 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 MIR6864-201ENST00000617935 70 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AP000676.3-201ENST00000623299 569 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIN3AQ96ST3 AL592437.2-201ENST00000421655 2434 ntBASIC4.31□□□□□ -1.72
SIN3AQ96ST3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 Y_RNA.169-201ENST00000363745 96 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 Y_RNA.311-201ENST00000365068 96 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 RNU6-921P-201ENST00000384361 107 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 RNA5SP239-201ENST00000410218 129 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC011233.1-201ENST00000422812 283 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 OR6K5P-201ENST00000447050 945 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 RPL27AP5-201ENST00000469428 449 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC011825.1-201ENST00000484967 388 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 OR2A20P-203ENST00000498397 1268 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC090071.1-201ENST00000507713 644 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 SNORD116-26-201ENST00000516006 96 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC105185.1-201ENST00000518705 535 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 SNORD39.3-201ENST00000584451 71 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AL133507.1-201ENST00000605269 557 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 HSPE1P14-201ENST00000605812 302 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AL513477.2-201ENST00000607858 568 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC097065.2-201ENST00000608159 533 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC007529.1-201ENST00000418574 2178 ntBASIC4.3□□□□□ -1.72
SIN3AQ96ST3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.3□□□□□ -1.72
SIN3AQ96ST3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 AP000526.1-201ENST00000603308 1388 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 ZNF542P-204ENST00000482727 1305 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 SGO1P2-201ENST00000429458 1589 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 AL450338.1-201ENST00000407987 512 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 YWHAZP7-201ENST00000436906 631 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 HMGN3P1-201ENST00000453847 193 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 snoU13.7-201ENST00000459220 104 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 MTND1P16-201ENST00000465177 898 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 NIPA2P2-201ENST00000496376 1083 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 AC110792.2-201ENST00000510278 224 ntBASIC4.29□□□□□ -1.72
SIN3AQ96ST3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.29□□□□□ -1.72
SIN3AQ96ST3 AC074051.3-201ENST00000570238 358 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms