Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC103988.1-201ENST00000566382 2177 ntBASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 HMGB1P10-201ENST00000395823 563 ntBASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 AC104308.1-201ENST00000454621 333 ntBASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 HMGN2P23-201ENST00000456759 269 ntBASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 AC006023.2-201ENST00000609916 167 ntBASIC2.54□□□□□ -2
CDK5RAP2Q96SN8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 AC011978.2-201ENST00000569835 2054 ntBASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 SNORA7.2-201ENST00000364446 145 ntBASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 RAD23BP2-201ENST00000416003 1207 ntBASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 FAM92A1P2-202ENST00000504766 877 ntBASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 MIR4474-201ENST00000579189 78 ntBASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 SNRPGP15-201ENST00000600149 222 ntBASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDK5RAP2Q96SN8 RNA5SP88-201ENST00000365560 109 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 SNORA17.3-201ENST00000391159 129 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 MTCYBP29-201ENST00000436327 1006 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 HMGB1P12-201ENST00000438594 598 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AC022884.3-201ENST00000579571 248 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 RPL23AP78-201ENST00000599928 470 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AL356575.1-201ENST00000603008 283 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AC092650.2-201ENST00000619984 902 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AC093591.3-201ENST00000634516 308 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 OR4G2P-202ENST00000641004 1759 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 RNA5SP99-201ENST00000364020 114 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 MIR607-201ENST00000385241 96 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 RPL23AP39-201ENST00000415533 405 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 ISCA1P6-201ENST00000427740 390 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AC073901.1-201ENST00000462471 408 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 OR5BN1P-201ENST00000532955 829 ntBASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CDK5RAP2Q96SN8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 AL161781.1-201ENST00000354277 403 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 U8.13-201ENST00000390842 128 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 RNU1-101P-201ENST00000391171 127 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 TRIM60P18-201ENST00000441518 828 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 MIR4448-201ENST00000584360 86 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 AC245517.5-201ENST00000611529 162 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 AC104237.2-201ENST00000612456 443 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 RPL23AP61-201ENST00000623642 466 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 MIR4496-201ENST00000635896 61 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 AC002546.1-201ENST00000588041 2504 ntBASIC2.51□□□□□ -2.01
CDK5RAP2Q96SN8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 SNORA11.4-201ENST00000408823 129 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 RNA5SP498-201ENST00000411342 120 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 RSL24D1P2-201ENST00000445584 366 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 CBWD4P-201ENST00000445695 655 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 MTND2P8-201ENST00000450555 1025 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 TPMTP4-201ENST00000450749 678 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 AL133393.1-201ENST00000603277 287 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 AC016727.1-205ENST00000605437 569 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 RPL37P6-202ENST00000464216 403 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 CKS1BP2-201ENST00000497342 240 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 RNA5SP468-201ENST00000516782 93 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 AC104986.1-201ENST00000517978 436 ntBASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.5□□□□□ -2.01
CDK5RAP2Q96SN8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDK5RAP2Q96SN8 VTA1P1-201ENST00000414044 866 ntBASIC2.49□□□□□ -2.01
CDK5RAP2Q96SN8 MORF4L1P6-201ENST00000418771 268 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms