Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC009951.1-201ENST00000623674 2614 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 AC121333.1-201ENST00000567488 2709 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 ADAM5-202ENST00000399789 1942 ntBASIC4.8□□□□□ -1.64
PTCHD1Q96NR3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 SMG1P4-204ENST00000523028 4131 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 RNU6-1287P-201ENST00000362914 107 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 RNU6-254P-201ENST00000363377 107 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 RNU6-339P-201ENST00000384310 107 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 RNU6-1060P-201ENST00000384664 107 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 Y_RNA.576-201ENST00000384781 102 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 RNU11-4P-201ENST00000391149 133 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AL645927.1-201ENST00000396783 406 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 MTCYBP4-201ENST00000401524 249 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 RNU6-1304P-201ENST00000411374 106 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 KNOP1P3-201ENST00000446933 426 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 ST13P14-201ENST00000474095 734 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 RPL39P5-202ENST00000512505 151 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 APOOP3-201ENST00000536787 586 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AC008737.2-201ENST00000599446 118 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AC136443.5-201ENST00000603741 370 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AC012443.1-201ENST00000605605 231 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 Z98200.1-201ENST00000607298 470 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AC093838.1-201ENST00000613014 469 ntBASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.79□□□□□ -1.64
PTCHD1Q96NR3 AL359893.1-201ENST00000447628 1580 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 ASNSP1-201ENST00000518311 1939 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RNU6-1252P-201ENST00000363054 104 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 Y_RNA.144-201ENST00000363521 113 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 SNORD113-7-201ENST00000363762 77 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RNU6-960P-201ENST00000364056 120 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 SNORA2.3-201ENST00000383920 135 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 Y_RNA.395-201ENST00000383945 109 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AL035079.1-201ENST00000405210 287 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RNU2-47P-201ENST00000410649 186 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RN7SKP159-201ENST00000410657 292 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RNU6-370P-201ENST00000411008 104 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RPL37P10-201ENST00000412884 288 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 GJA6P-201ENST00000415117 1042 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC104806.1-201ENST00000508720 308 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RNU6-566P-201ENST00000516790 107 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 RNU6-1092P-201ENST00000516955 87 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 DEFB108D-201ENST00000527787 222 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 GSTP1P1-201ENST00000548078 319 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 MIR4716-201ENST00000579628 84 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 MIR4472-2-201ENST00000582069 67 ntBASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.78□□□□□ -1.64
PTCHD1Q96NR3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms