Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.93□□□□□ -2.1
CFAP54Q96N23 LRRC77P-213ENST00000637727 880 ntBASIC1.93□□□□□ -2.1
CFAP54Q96N23 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CFAP54Q96N23 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 MIR142-201ENST00000384835 87 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC002076.2-201ENST00000617362 122 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC116158.1-201ENST00000560231 2129 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC022336.2-201ENST00000568966 2538 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 MTND5P27-201ENST00000428871 1720 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AL031274.2-201ENST00000599419 203 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC073869.7-201ENST00000640874 297 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 XPOTP1-201ENST00000443317 2398 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 RPL23AP55-201ENST00000498163 452 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 GZMAP1-201ENST00000503054 631 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 TTC39CP1-201ENST00000512513 755 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC016957.1-201ENST00000534895 309 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC131902.3-201ENST00000611767 581 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 AC084035.1-201ENST00000634543 607 ntBASIC1.92□□□□□ -2.1
CFAP54Q96N23 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CFAP54Q96N23 AC092326.2-201ENST00000624772 1561 ntBASIC1.91□□□□□ -2.1
CFAP54Q96N23 RNU1-138P-201ENST00000384093 164 ntBASIC1.91□□□□□ -2.1
CFAP54Q96N23 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 AL138799.3-201ENST00000438968 350 ntBASIC1.91□□□□□ -2.1
CFAP54Q96N23 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 AC006390.1-201ENST00000508068 283 ntBASIC1.91□□□□□ -2.1
CFAP54Q96N23 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 MIR3186-201ENST00000577404 85 ntBASIC1.91□□□□□ -2.1
CFAP54Q96N23 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
CFAP54Q96N23 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 CBWD4P-201ENST00000445695 655 ntBASIC1.91□□□□□ -2.1
CFAP54Q96N23 AL035411.2-201ENST00000604022 421 ntBASIC1.91□□□□□ -2.1
CFAP54Q96N23 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CFAP54Q96N23 MTND4P35-201ENST00000604257 1375 ntBASIC1.91□□□□□ -2.1
CFAP54Q96N23 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
CFAP54Q96N23 SNORA7.1-201ENST00000363750 139 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CFAP54Q96N23 SEPT7P7-201ENST00000420492 1301 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 UBE2V1P6-201ENST00000430840 422 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 Z99714.1-201ENST00000450463 807 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 CDC42P1-201ENST00000456658 548 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.9□□□□□ -2.1
CFAP54Q96N23 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.9□□□□□ -2.1
CFAP54Q96N23 AGGF1P8-201ENST00000562979 1000 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 AC136443.5-201ENST00000603741 370 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 OR10AB1P-201ENST00000609613 938 ntBASIC1.9□□□□□ -2.1
CFAP54Q96N23 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.9□□□□□ -2.1
CFAP54Q96N23 AC008173.1-201ENST00000418901 264 ntBASIC1.9□□□□□ -2.11
CFAP54Q96N23 RPL36AP33-201ENST00000450395 310 ntBASIC1.9□□□□□ -2.11
CFAP54Q96N23 AC104564.1-201ENST00000493028 407 ntBASIC1.9□□□□□ -2.11
CFAP54Q96N23 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.9□□□□□ -2.11
CFAP54Q96N23 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.9□□□□□ -2.11
CFAP54Q96N23 AP000889.2-201ENST00000532684 490 ntBASIC1.9□□□□□ -2.11
CFAP54Q96N23 AL160237.3-201ENST00000604114 1013 ntBASIC1.9□□□□□ -2.11
CFAP54Q96N23 PROS2P-201ENST00000474651 1951 ntBASIC1.9□□□□□ -2.11
CFAP54Q96N23 DDX10P1-201ENST00000448545 1933 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 GSTA12P-201ENST00000402398 508 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC093151.1-201ENST00000427711 313 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC006116.7-201ENST00000590141 756 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC009501.3-201ENST00000605001 1352 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
CFAP54Q96N23 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CFAP54Q96N23 MIR3074-201ENST00000384885 81 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 RN7SKP49-201ENST00000516675 260 ntBASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.89□□□□□ -2.11
CFAP54Q96N23 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CFAP54Q96N23 AC095050.2-201ENST00000510748 1458 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms