Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SNRPGP15-201ENST00000600149 222 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC090578.1-201ENST00000604955 591 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC012603.1-201ENST00000606424 528 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 OR10AB1P-201ENST00000609613 938 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC109347.2-201ENST00000610220 349 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC023043.4-201ENST00000612081 449 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC013476.2-201ENST00000614456 459 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 AC091834.1-201ENST00000614543 472 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 LINC02471-203ENST00000641941 4752 ntBASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDK5RAP3Q96JB5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AL157700.1-201ENST00000561973 1432 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 RNY4P34-201ENST00000364779 95 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 RNU6-259P-201ENST00000383999 107 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 SNORD51-201ENST00000384320 80 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 Y_RNA.516-201ENST00000384541 124 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 RNU6-821P-201ENST00000390995 107 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 RNU6-837P-201ENST00000391056 108 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 RPL7P25-201ENST00000404151 721 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 RNA5SP104-201ENST00000410989 118 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC245052.5-201ENST00000416320 649 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 NANOGP6-201ENST00000429190 847 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 EZH2P1-201ENST00000431167 291 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AL358472.1-201ENST00000431295 329 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC073614.1-201ENST00000438690 650 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 MTND6P13-201ENST00000443510 523 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AP1S2P1-201ENST00000457344 379 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 RPS23P7-201ENST00000466210 444 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC025445.1-201ENST00000502728 300 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AP003467.2-201ENST00000520175 319 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 EEF1B2P4-201ENST00000551398 348 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 HMGN1P30-201ENST00000589286 268 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 MIR378J-201ENST00000611988 109 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC110994.2-201ENST00000635481 492 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 ZNF962P-201ENST00000443465 3140 ntBASIC4.57□□□□□ -1.68
CDK5RAP3Q96JB5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC126755.2-208ENST00000327792 462 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC138969.1-213ENST00000331436 462 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 RNU6-335P-201ENST00000364563 113 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 SNORA62-201ENST00000365493 153 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 RHOT1P2-201ENST00000366423 333 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 Y_RNA.582-201ENST00000391023 95 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 RPS26P8-201ENST00000393490 348 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 RPS3AP36-201ENST00000398190 775 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AL049693.1-201ENST00000402760 611 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 MIR1251-201ENST00000408552 70 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 RPL17P49-201ENST00000443728 411 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 NPM1P49-201ENST00000448027 714 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 NANOGNBP1-201ENST00000448444 480 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC021382.1-201ENST00000483523 359 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 CEACAMP10-202ENST00000495431 496 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC068305.1-201ENST00000497406 726 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AL358832.1-201ENST00000497800 389 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 HIGD1AP5-201ENST00000529959 259 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AP003122.4-201ENST00000530980 758 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC009101.1-201ENST00000568135 242 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms