Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 AC100793.4-201ENST00000613683 429 ntBASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 AL139089.1-201ENST00000620372 975 ntBASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 AL356585.4-201ENST00000623078 1229 ntBASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 OR5BE1P-202ENST00000641168 1176 ntBASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 AC116667.1-201ENST00000604855 2072 ntBASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHMP4CQ96CF2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 RNU2-47P-201ENST00000410649 186 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 HSPE1P12-201ENST00000412576 301 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 MTCO3P41-201ENST00000414801 328 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AC108032.1-201ENST00000416706 207 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AL033528.1-201ENST00000453780 140 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 OR9M1P-201ENST00000459641 921 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 RPL38P1-201ENST00000460914 211 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 RNU7-143P-201ENST00000516781 65 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 CR383656.7-201ENST00000548164 174 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AC012603.1-201ENST00000606424 528 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 RNU4-89P-201ENST00000607443 133 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 OR10AB1P-201ENST00000609613 938 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AC008250.2-201ENST00000615261 205 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AC104010.1-201ENST00000616889 150 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AC009509.4-201ENST00000619202 509 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 AL359715.5-201ENST00000623431 443 ntBASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CHMP4CQ96CF2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 FRG1BP-201ENST00000278882 761 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 SNORD35B-201ENST00000363660 87 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 SNORA75-201ENST00000384158 137 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 RPL32P23-201ENST00000397237 405 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 Y_RNA.608-201ENST00000410647 95 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 HSFY6P-201ENST00000445573 403 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC104308.1-201ENST00000454621 333 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC139783.2-201ENST00000504847 1145 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 FTH1P21-201ENST00000512179 511 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 ZNF519P3-201ENST00000557158 1032 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC007599.1-201ENST00000568688 1174 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC146944.4-201ENST00000602697 718 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC138932.5-201ENST00000617759 563 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC002550.2-201ENST00000621246 394 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AL590240.3-201ENST00000621416 943 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AL603839.4-201ENST00000624658 1005 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 MARK2P15-201ENST00000432204 2186 ntBASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHMP4CQ96CF2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 XIAPP3-201ENST00000312918 795 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 Y_RNA.46-201ENST00000362695 102 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 RN7SKP280-201ENST00000364196 304 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 RNU4-75P-201ENST00000364621 146 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 RNU6-1119P-201ENST00000384349 108 ntBASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHMP4CQ96CF2 DEFB108C-201ENST00000400154 252 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms