Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AL161781.1-201ENST00000354277 403 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 RPL32P3-201ENST00000359025 275 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 RNU6-50P-201ENST00000362356 103 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 RNU6-1214P-201ENST00000363650 109 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 Y_RNA.169-201ENST00000363745 96 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC016397.1-201ENST00000412463 242 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 RPS15AP38-201ENST00000413110 372 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC083875.1-201ENST00000419509 405 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 YWHAZP7-201ENST00000436906 631 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 HMGN2P20-201ENST00000437531 273 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 OR6K5P-201ENST00000447050 945 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 ARPC3P2-201ENST00000457786 533 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 RPS23P7-201ENST00000466210 444 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 RPL7P19-201ENST00000469948 618 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 RPL7P23-201ENST00000493874 747 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 FCF1P3-201ENST00000496394 590 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC010486.2-201ENST00000505572 483 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC110768.1-201ENST00000509222 400 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC118465.1-201ENST00000513820 1271 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC087373.1-201ENST00000524920 491 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 MIR4474-201ENST00000579189 78 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AP005136.1-201ENST00000579765 429 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AP001029.3-201ENST00000588063 596 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 BDH2P1-201ENST00000602288 736 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AL031281.1-201ENST00000604049 488 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC002550.2-201ENST00000621246 394 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AP000676.3-201ENST00000623299 569 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 MIR6830-201ENST00000636015 70 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 AC068137.4-201ENST00000638485 296 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 OR52H1-202ENST00000641796 1061 ntBASIC3.25□□□□□ -1.89
RFT1Q96AA3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
RFT1Q96AA3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFT1Q96AA3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC058791.1-201ENST00000608412 3198 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AP002088.1-201ENST00000382740 395 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 SNORA56-201ENST00000383966 129 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 SNORD116-8-201ENST00000384365 95 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 MIR199A2-201ENST00000385289 110 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 RPS6P15-201ENST00000431996 751 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 MTND4P32-201ENST00000437189 1237 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 MTCO1P27-201ENST00000448269 226 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 SNORD121B-201ENST00000458838 81 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 RPS7P7-201ENST00000463499 571 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC026979.1-201ENST00000492525 396 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RFT1Q96AA3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC136618.2-201ENST00000575091 400 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 Z94722.1-201ENST00000604328 474 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms