Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AP000942.1-201ENST00000463969 747 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RPL21P126-201ENST00000470049 478 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RN7SL809P-201ENST00000482040 297 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RPS3AP50-201ENST00000487064 803 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 AC117522.3-201ENST00000507974 584 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 RNA5SP497-201ENST00000516081 97 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 SCARNA24.1-201ENST00000516465 137 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AC105029.1-201ENST00000520250 669 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AP000827.1-201ENST00000527814 258 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AC100770.1-201ENST00000532310 322 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.22□□□□□ -1.57
BRF1Q92994 AC063949.1-201ENST00000552900 865 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AC078814.3-201ENST00000553036 491 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF1Q92994 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 AC084783.1-201ENST00000565846 910 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 AC233702.9-201ENST00000581528 203 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF1Q92994 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.22□□□□□ -1.57
BRF1Q92994 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.22□□□□□ -1.57
BRF1Q92994 KC877982.1-201ENST00000602313 470 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 RAD17P1-201ENST00000418130 2042 ntBASIC5.22□□□□□ -1.57
BRF1Q92994 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF1Q92994 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF1Q92994 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF1Q92994 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF1Q92994 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.22□□□□□ -1.57
BRF1Q92994 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF1Q92994 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BRF1Q92994 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.22□□□□□ -1.57
BRF1Q92994 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
BRF1Q92994 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
BRF1Q92994 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
BRF1Q92994 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.21□□□□□ -1.57
BRF1Q92994 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
BRF1Q92994 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
BRF1Q92994 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
BRF1Q92994 SNORA63-201ENST00000363450 132 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 Y_RNA.255-201ENST00000364581 97 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 RNU6-332P-201ENST00000391193 108 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 CYB5AP4-201ENST00000396692 399 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AL162578.1-201ENST00000406202 378 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 RPS16P5-201ENST00000406501 404 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 SNORA74C-2-201ENST00000411179 201 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC004987.3-201ENST00000413879 771 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF1Q92994 AL139095.3-201ENST00000419672 1203 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AL358176.3-201ENST00000420757 454 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF1Q92994 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF1Q92994 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF1Q92994 RPL7P12-201ENST00000446719 750 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC233702.1-201ENST00000482905 502 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC012158.1-204ENST00000483430 465 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF1Q92994 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF1Q92994 SNORA19.2-201ENST00000516013 114 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF1Q92994 IGLV3-26-201ENST00000520756 302 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AP003497.1-201ENST00000528472 562 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 OR5BN1P-201ENST00000532955 829 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF1Q92994 AC023050.3-201ENST00000541142 333 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC092470.1-201ENST00000546187 132 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC093027.1-201ENST00000546698 429 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF1Q92994 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF1Q92994 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.21□□□□□ -1.58
BRF1Q92994 AC068831.4-201ENST00000556118 109 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.21□□□□□ -1.58
BRF1Q92994 AC060771.1-201ENST00000582031 164 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC007448.1-201ENST00000582714 234 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC105224.1-201ENST00000587055 421 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AC010525.2-201ENST00000590920 195 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF1Q92994 AL354950.2-201ENST00000617939 290 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 AL160413.1-201ENST00000622780 310 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF1Q92994 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF1Q92994 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF1Q92994 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.21□□□□□ -1.58
BRF1Q92994 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF1Q92994 AC100810.6-201ENST00000638068 285 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 RIOK3P1-201ENST00000418778 1528 ntBASIC5.21□□□□□ -1.58
BRF1Q92994 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
BRF1Q92994 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.21□□□□□ -1.58
BRF1Q92994 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
BRF1Q92994 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BRF1Q92994 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF1Q92994 SCN1A-220ENST00000641603 12506 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 BTBD10P1-201ENST00000549824 1352 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF1Q92994 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF1Q92994 RNA5SP22-201ENST00000365393 109 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 RNU6-692P-201ENST00000384496 107 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms