Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SDCBPP1-201ENST00000440192 890 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC4Q92889 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC4Q92889 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC4Q92889 ABCF2P2-201ENST00000450549 296 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC4Q92889 RNF138P1-201ENST00000502765 546 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC110792.2-201ENST00000510278 224 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC016065.2-201ENST00000514530 444 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 RN7SKP82-201ENST00000516786 223 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 OR5BC1P-201ENST00000529327 739 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC104383.1-201ENST00000530297 370 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC4Q92889 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC4Q92889 AC124068.1-201ENST00000563131 678 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 CYP4A43P-201ENST00000568156 121 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 MIR3167-201ENST00000579623 85 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC012507.3-201ENST00000603556 477 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC055876.5-201ENST00000605667 259 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 MIR98-201ENST00000606724 119 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AL391813.2-201ENST00000609113 322 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AL355472.4-201ENST00000610233 626 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC063943.3-201ENST00000615562 356 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC091953.2-201ENST00000623979 160 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ERCC4Q92889 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ERCC4Q92889 AC092125.1-201ENST00000562568 1995 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.9□□□□□ -1.63
ERCC4Q92889 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ERCC4Q92889 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.9□□□□□ -1.63
ERCC4Q92889 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.9□□□□□ -1.63
ERCC4Q92889 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC4Q92889 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC4Q92889 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC4Q92889 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC4Q92889 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC4Q92889 A2MP1-204ENST00000566278 4130 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
ERCC4Q92889 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC4Q92889 AC079741.1-201ENST00000321498 212 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 CBX3P1-201ENST00000325243 554 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC4Q92889 RNU6-878P-201ENST00000384578 110 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 MIR192-201ENST00000384915 110 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 RNU6-876P-201ENST00000391295 104 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 MRPL42P2-201ENST00000403169 426 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AL356421.1-201ENST00000403255 413 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 RPS4XP9-201ENST00000405151 780 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 RNU6-908P-201ENST00000410160 94 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC127391.1-201ENST00000411737 98 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC4Q92889 JKAMPP1-201ENST00000413804 919 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 RPL31P2-201ENST00000413849 377 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC4Q92889 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC4Q92889 RPEP3-201ENST00000425462 676 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC4Q92889 AL359265.2-201ENST00000434367 631 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 USP9YP8-201ENST00000441913 500 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.89□□□□□ -1.63
ERCC4Q92889 AMD1P1-201ENST00000457220 922 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AP001992.1-205ENST00000462248 379 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC010326.1-201ENST00000462726 602 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 PLGLA-201ENST00000465668 449 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC091951.2-201ENST00000500762 203 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC4Q92889 AC046134.1-201ENST00000514454 666 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC107934.1-201ENST00000522215 217 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.89□□□□□ -1.63
ERCC4Q92889 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.89□□□□□ -1.63
ERCC4Q92889 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC4Q92889 OR5AN2P-201ENST00000534535 896 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC007424.1-203ENST00000554613 687 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.89□□□□□ -1.63
ERCC4Q92889 AC099489.2-201ENST00000574976 260 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AL139395.1-201ENST00000603662 160 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.89□□□□□ -1.63
ERCC4Q92889 AL161734.1-201ENST00000609720 557 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AL133173.2-201ENST00000614270 90 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC103858.2-201ENST00000621471 543 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 AC019278.1-201ENST00000623516 479 ntBASIC4.89□□□□□ -1.63
ERCC4Q92889 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ERCC4Q92889 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC4Q92889 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ERCC4Q92889 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC4Q92889 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC4Q92889 IQCB2P-201ENST00000401788 1633 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 SNORA70F-201ENST00000384142 135 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 RPS23P10-201ENST00000416185 486 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.88□□□□□ -1.63
ERCC4Q92889 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC4Q92889 AC245028.1-201ENST00000423259 256 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 RPL7P28-201ENST00000437739 740 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.88□□□□□ -1.63
ERCC4Q92889 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC4Q92889 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC4Q92889 AC073264.2-201ENST00000448886 166 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms