Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 snoU109.1-201ENST00000459339 135 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 RPL7P15-201ENST00000461190 712 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 RNU6-1095P-201ENST00000516148 108 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 MIR4528-201ENST00000577763 90 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC060771.1-201ENST00000582031 164 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC068790.2-201ENST00000602601 557 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC078795.2-201ENST00000602835 1252 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC011451.2-201ENST00000604303 598 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AL359999.1-201ENST00000604513 294 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC092354.2-201ENST00000607786 514 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 OR6R2P-201ENST00000609216 300 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 OR10AB1P-201ENST00000609613 938 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC012150.2-201ENST00000621300 544 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 FP236240.3-201ENST00000623061 327 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AC011460.1-201ENST00000636268 1834 ntBASIC4.06□□□□□ -1.76
HMGB4Q8WW32 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGB4Q8WW32 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AC106871.1-201ENST00000568324 3102 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 RNU6-114P-201ENST00000384704 105 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 RPS3AP3-201ENST00000411933 242 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 PDSS1P1-201ENST00000422953 1114 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AL353777.1-201ENST00000425552 326 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 RPL7P49-201ENST00000471402 708 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 PPIAP15-201ENST00000479662 484 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 RNU6-405P-201ENST00000516637 110 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 RNU6-528P-201ENST00000516926 100 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AP003467.2-201ENST00000520175 319 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AP003122.4-201ENST00000530980 758 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AC126177.3-201ENST00000551839 688 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 RPL21P5-201ENST00000554662 472 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AL031176.1-201ENST00000604554 466 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AC069200.1-201ENST00000609511 323 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AL355472.4-201ENST00000610233 626 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AC008250.2-201ENST00000615261 205 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AP001506.1-201ENST00000615444 211 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 AC009159.1-201ENST00000618386 642 ntBASIC4.05□□□□□ -1.76
HMGB4Q8WW32 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGB4Q8WW32 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL645937.1-201ENST00000641739 1652 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 SNORA63.1-201ENST00000362493 131 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 SNORA73.2-201ENST00000364946 201 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 ZNF885P-201ENST00000420174 1098 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 CYP4F29P-201ENST00000420685 446 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 USP9YP7-201ENST00000436723 430 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 RPL23AP89-201ENST00000439324 255 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL049734.2-201ENST00000441066 616 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 MTND6P13-201ENST00000443510 523 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 USP9YP32-201ENST00000452432 430 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 MTND1P9-201ENST00000453775 944 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AC109464.2-201ENST00000510242 943 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 Vault.1-201ENST00000516474 102 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 RNA5SP179-201ENST00000517284 121 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms