Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.89□□□□□ -2.11
CHD6Q8TD26 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
CHD6Q8TD26 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHD6Q8TD26 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
CHD6Q8TD26 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHD6Q8TD26 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.89□□□□□ -2.11
CHD6Q8TD26 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
CHD6Q8TD26 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHD6Q8TD26 RNA5SP257-201ENST00000363023 116 ntBASIC1.89□□□□□ -2.11
CHD6Q8TD26 DNAJC19P6-201ENST00000401853 280 ntBASIC1.89□□□□□ -2.11
CHD6Q8TD26 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.89□□□□□ -2.11
CHD6Q8TD26 USP9YP5-201ENST00000511770 630 ntBASIC1.89□□□□□ -2.11
CHD6Q8TD26 AC002487.1-201ENST00000604565 994 ntBASIC1.89□□□□□ -2.11
CHD6Q8TD26 MIR7153-201ENST00000637758 57 ntBASIC1.89□□□□□ -2.11
CHD6Q8TD26 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHD6Q8TD26 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 RNA5SP139-201ENST00000364340 117 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 AC147055.1-201ENST00000509261 750 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 RNU6-1223P-201ENST00000517124 104 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHD6Q8TD26 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHD6Q8TD26 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 Y_RNA.115-201ENST00000363272 98 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 AL138799.3-201ENST00000438968 350 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 AC008015.1-201ENST00000555505 465 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 AL121821.2-201ENST00000556081 394 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 NIFKP8-201ENST00000560500 874 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 AC083760.1-201ENST00000589621 670 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 AC011492.1-201ENST00000600023 315 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 CU459211.1-201ENST00000635667 749 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CHD6Q8TD26 GTF2H2B-203ENST00000508065 1432 ntBASIC1.88□□□□□ -2.11
CHD6Q8TD26 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 AL138785.1-201ENST00000425821 331 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 AC009237.8-201ENST00000445492 379 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 EXTL2P1-201ENST00000446218 416 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 XKRY-201ENST00000510392 1100 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 MIR1273G-201ENST00000577677 100 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 uc_338.5-201ENST00000611839 155 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHD6Q8TD26 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHD6Q8TD26 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHD6Q8TD26 RNU1-100P-201ENST00000365255 165 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 AL034379.1-201ENST00000423216 253 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 RPL30P3-201ENST00000424262 333 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 AL606490.7-201ENST00000433136 191 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 AC055876.1-202ENST00000567053 138 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 OR10AB1P-201ENST00000609613 938 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 AC093591.3-201ENST00000634516 308 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CHD6Q8TD26 AC008264.2-201ENST00000610193 3731 ntBASIC1.87□□□□□ -2.11
CHD6Q8TD26 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHD6Q8TD26 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
CHD6Q8TD26 MIR96-201ENST00000362288 78 ntBASIC1.86□□□□□ -2.11
CHD6Q8TD26 SRIP3-201ENST00000413200 219 ntBASIC1.86□□□□□ -2.11
CHD6Q8TD26 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHD6Q8TD26 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.86□□□□□ -2.11
CHD6Q8TD26 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHD6Q8TD26 RPS29P1-201ENST00000465274 159 ntBASIC1.86□□□□□ -2.11
CHD6Q8TD26 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
CHD6Q8TD26 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CHD6Q8TD26 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHD6Q8TD26 AC241377.1-201ENST00000619797 406 ntBASIC1.86□□□□□ -2.11
CHD6Q8TD26 RN7SKP123-201ENST00000410732 291 ntBASIC1.86□□□□□ -2.11
CHD6Q8TD26 RN7SKP60-201ENST00000516985 239 ntBASIC1.86□□□□□ -2.11
CHD6Q8TD26 AGGF1P8-201ENST00000562979 1000 ntBASIC1.86□□□□□ -2.11
CHD6Q8TD26 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.86□□□□□ -2.11
CHD6Q8TD26 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.86□□□□□ -2.11
CHD6Q8TD26 AC084768.2-201ENST00000622736 221 ntBASIC1.86□□□□□ -2.11
CHD6Q8TD26 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHD6Q8TD26 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CHD6Q8TD26 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
CHD6Q8TD26 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.85□□□□□ -2.11
CHD6Q8TD26 RNA5SP210-201ENST00000391034 120 ntBASIC1.85□□□□□ -2.11
CHD6Q8TD26 ATP5F1P1-201ENST00000433775 569 ntBASIC1.85□□□□□ -2.11
CHD6Q8TD26 YWHAZP7-201ENST00000436906 631 ntBASIC1.85□□□□□ -2.11
CHD6Q8TD26 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
CHD6Q8TD26 AC114801.2-201ENST00000503825 781 ntBASIC1.85□□□□□ -2.11
CHD6Q8TD26 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.85□□□□□ -2.11
CHD6Q8TD26 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.85□□□□□ -2.11
CHD6Q8TD26 AP000857.1-201ENST00000532151 543 ntBASIC1.85□□□□□ -2.11
CHD6Q8TD26 AC136443.5-201ENST00000603741 370 ntBASIC1.85□□□□□ -2.11
CHD6Q8TD26 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms