Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01006Q8NI28 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.74□□□□□ -1.97
LINC01006Q8NI28 AL022578.1-201ENST00000439330 1433 ntBASIC2.74□□□□□ -1.97
LINC01006Q8NI28 AC018555.1-201ENST00000567548 1980 ntBASIC2.74□□□□□ -1.97
LINC01006Q8NI28 BDP1P-201ENST00000582658 1990 ntBASIC2.74□□□□□ -1.97
LINC01006Q8NI28 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01006Q8NI28 OTUD4P1-201ENST00000237841 3067 ntBASIC2.74□□□□□ -1.97
LINC01006Q8NI28 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01006Q8NI28 MTND4P16-201ENST00000466108 1367 ntBASIC2.74□□□□□ -1.97
LINC01006Q8NI28 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AL645937.1-201ENST00000641739 1652 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 RNA5SP88-201ENST00000365560 109 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 RNU6-730P-201ENST00000383954 104 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 SNORA11.2-201ENST00000408318 127 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 RNA5SP239-201ENST00000410218 129 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 RN7SKP111-201ENST00000410349 271 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 TPMTP3-201ENST00000411928 735 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 MTCYBP24-201ENST00000420387 1106 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AL390023.1-201ENST00000428836 262 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 MRPS18BP2-201ENST00000434310 759 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 LARP1BP3-201ENST00000437229 869 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC118469.1-201ENST00000442943 488 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 ZNF114P1-201ENST00000453500 292 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 USP9YP34-201ENST00000453983 808 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC092045.1-201ENST00000495716 1231 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 OR5H5P-201ENST00000503164 928 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC114981.1-201ENST00000503897 678 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC109458.1-201ENST00000508858 316 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 FCF1P8-201ENST00000510322 597 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC239860.2-201ENST00000525886 270 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC007954.1-201ENST00000554198 494 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 HSPE1P3-201ENST00000559254 309 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC106782.4-201ENST00000568264 210 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AL513477.2-201ENST00000607858 568 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 CYP3A51P-201ENST00000633513 256 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01006Q8NI28 AL445523.1-201ENST00000451184 1362 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 CR381670.1-201ENST00000624291 1693 ntBASIC2.73□□□□□ -1.97
LINC01006Q8NI28 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 GNG5P1-201ENST00000255500 204 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 RNU6-263P-201ENST00000363811 107 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 RNU6-289P-201ENST00000364093 107 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 RNU6-723P-201ENST00000383973 107 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 RNU5A-2P-201ENST00000384337 116 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 RNU6-952P-201ENST00000391164 108 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 HMGB1P17-201ENST00000403495 628 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 AL031577.2-201ENST00000404133 280 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 U3.39-201ENST00000408569 239 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 NPM1P11-201ENST00000417106 855 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.72□□□□□ -1.97
LINC01006Q8NI28 FNDC3CP-201ENST00000420795 1155 ntBASIC2.72□□□□□ -1.97
LINC01006Q8NI28 OFD1P18Y-201ENST00000420889 959 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms