Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
DTX3Q8N9I9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
DTX3Q8N9I9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
DTX3Q8N9I9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 IQCB2P-201ENST00000401788 1633 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC005522.1-201ENST00000395416 346 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC009804.1-201ENST00000400949 179 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AL592114.1-201ENST00000403842 483 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AL121834.1-202ENST00000404494 277 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 MIR548F5-201ENST00000408421 86 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 RNU4-14P-201ENST00000410858 122 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AL133173.1-201ENST00000423458 397 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 RPL23AP38-201ENST00000423801 469 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 Z82205.1-201ENST00000428456 297 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 RPS3AP52-201ENST00000435639 297 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 RPL35AP22-201ENST00000436855 335 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 Z80107.2-201ENST00000445127 392 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AL356981.1-201ENST00000454879 684 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC100832.1-201ENST00000471945 383 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 ST13P14-201ENST00000474095 734 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC087385.1-201ENST00000475062 312 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 RN7SL809P-201ENST00000482040 297 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 RPS24P16-201ENST00000497294 392 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 Y_RNA.654-201ENST00000497848 106 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 HMGB3P15-201ENST00000507326 574 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC005798.1-201ENST00000513715 387 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 SCARNA16.4-201ENST00000516956 187 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 Y_RNA.711-201ENST00000516993 102 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 BNIP3P25-201ENST00000596023 559 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 DPPA3P3-201ENST00000603842 430 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AL080274.1-201ENST00000605565 220 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AP001486.3-201ENST00000615334 372 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AC007546.1-201ENST00000619452 559 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AP001784.1-201ENST00000624107 428 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 PHKBP1-201ENST00000450951 1951 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 BDP1P-201ENST00000582658 1990 ntBASIC4.5□□□□□ -1.69
DTX3Q8N9I9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DTX3Q8N9I9 AL442639.1-201ENST00000625030 1899 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 RN7SKP44-201ENST00000363602 316 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 RNA5SP28-201ENST00000363841 119 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 RNU6-188P-201ENST00000364207 107 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 Y_RNA.339-201ENST00000365325 102 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 SNORA33.2-201ENST00000365413 134 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 RNU5E-6P-201ENST00000365574 115 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 MIR708-201ENST00000390708 88 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 HSPA8P15-201ENST00000401676 786 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 RNU4-34P-201ENST00000410431 124 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 AC007738.1-201ENST00000413892 348 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 OR6E1P-201ENST00000414424 923 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 VN1R36P-201ENST00000414936 291 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.49□□□□□ -1.69
DTX3Q8N9I9 RPL35AP21-201ENST00000437667 333 ntBASIC4.49□□□□□ -1.69
DTX3Q8N9I9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms