Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 RNU6-97P-201ENST00000363387 104 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 Y_RNA.194-201ENST00000363985 102 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 PTMAP2-201ENST00000397627 327 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 RN7SKP156-201ENST00000410308 342 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 MTCO2P34-201ENST00000421994 607 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC018644.1-201ENST00000429934 551 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 MTND1P28-201ENST00000435623 950 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC091862.1-201ENST00000438016 1100 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AF228730.2-201ENST00000438784 848 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AL356535.1-201ENST00000440335 398 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 MTCO1P19-201ENST00000443487 500 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 FAM103A2P-201ENST00000444122 354 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 RN7SL271P-201ENST00000487601 295 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 Y_RNA.655-201ENST00000515919 96 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 CYCSP30-201ENST00000546447 172 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC090616.5-202ENST00000582111 297 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC022146.1-201ENST00000595307 847 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC104662.1-201ENST00000604448 511 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC011816.2-201ENST00000607089 556 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC039056.2-201ENST00000622261 511 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 CR392039.5-201ENST00000623201 510 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 CCT4P2-201ENST00000233836 1548 ntBASIC3.63□□□□□ -1.83
BEST3Q8N1M1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 SNORA57.3-201ENST00000411095 141 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 RPL7AP73-201ENST00000413490 353 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC108734.1-201ENST00000439549 399 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AL500522.2-201ENST00000448562 343 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 SSXP1-201ENST00000453640 473 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 MTCO1P42-201ENST00000457379 726 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 CBX3P3-201ENST00000508108 532 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 RNU6-1003P-201ENST00000517099 105 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 NARSP2-201ENST00000518524 679 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 RFPL1S-203ENST00000539579 330 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 SETP2-201ENST00000553886 926 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC022968.1-201ENST00000567372 442 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 MIR5697-201ENST00000578045 78 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 MIR548AB-201ENST00000584917 84 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 BNIP3P33-201ENST00000598912 569 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 MIR486-1-201ENST00000612171 68 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AL139089.1-201ENST00000620372 975 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC092656.1-203ENST00000624134 423 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 AC112200.1-201ENST00000625015 234 ntBASIC3.62□□□□□ -1.83
BEST3Q8N1M1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BEST3Q8N1M1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.61□□□□□ -1.83
BEST3Q8N1M1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms