Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 U3.7-201ENST00000363668 216 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 HSPA8P15-201ENST00000401676 786 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AL359643.1-201ENST00000404109 423 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AL023807.1-201ENST00000407932 359 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AP000275.1-201ENST00000411943 390 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RBMY1KP-201ENST00000423480 476 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RPL7P37-201ENST00000425095 738 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 USP9YP30-201ENST00000430729 455 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RPL7L1P9-201ENST00000431298 745 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AC073910.1-201ENST00000445047 438 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RPS15AP27-201ENST00000449183 343 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AC092647.2-201ENST00000452998 253 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AC108860.1-201ENST00000484521 383 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RN7SL814P-201ENST00000487715 300 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RN7SL447P-201ENST00000494711 245 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AC068305.1-201ENST00000497406 726 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AC026784.1-201ENST00000507986 352 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AC108471.1-201ENST00000513977 287 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 DYNLL1P4-201ENST00000549314 266 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AC068446.3-201ENST00000555285 382 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AL162431.4-201ENST00000604674 411 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 AP001486.3-201ENST00000615334 372 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC074029.4-201ENST00000624796 1859 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 PABPC1P6-201ENST00000445594 1829 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC009902.3-201ENST00000606235 2172 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC023421.1-201ENST00000590535 1785 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU6-212P-201ENST00000362642 104 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU6-1059P-201ENST00000363752 98 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU1-146P-201ENST00000364015 165 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU6-188P-201ENST00000364207 107 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 SNORA24.1-201ENST00000384401 135 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 MIR589-201ENST00000385238 99 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNA5SP339-201ENST00000390987 122 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 DSTNP4-201ENST00000399472 474 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC011933.1-201ENST00000413334 321 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 BX682237.1-201ENST00000415016 335 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC108734.1-201ENST00000439549 399 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AL163193.1-201ENST00000444895 788 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC116533.1-201ENST00000459748 321 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC105758.1-201ENST00000506038 399 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 PGAM1P13-201ENST00000507497 754 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU2-10P-201ENST00000516375 211 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU6-1332P-201ENST00000516666 104 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU6-255P-201ENST00000516957 105 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNU6-570P-201ENST00000517051 105 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 RNA5SP373-201ENST00000517271 95 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 SOD1P3-201ENST00000518682 454 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 IGLV2-28-201ENST00000520681 304 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 MIR5692C1-201ENST00000585309 91 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC012433.1-201ENST00000588916 398 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC115085.1-201ENST00000588924 229 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC011494.1-201ENST00000596454 237 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC104763.2-201ENST00000604179 382 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AC004792.1-201ENST00000614523 137 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 AL445363.3-201ENST00000623080 671 ntBASIC4.81□□□□□ -1.64
ATG4DQ86TL0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4DQ86TL0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms