Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AL391987.6-201ENST00000305671 199 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.54-201ENST00000362766 105 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 RNY1P16-201ENST00000363063 111 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.183-201ENST00000363882 113 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.269-201ENST00000364685 89 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.352-201ENST00000365439 102 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 SNORA5.1-201ENST00000384275 131 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MIR137-201ENST00000385223 102 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MIR143-201ENST00000385300 106 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-493P-201ENST00000391321 108 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 RN7SKP286-201ENST00000410894 299 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AC099670.2-201ENST00000435130 321 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AC064862.4-201ENST00000442180 334 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 RPL36AP39-201ENST00000445859 318 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 RPL21P103-201ENST00000479921 488 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AC069499.1-201ENST00000489433 509 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 CBX3P8-201ENST00000532412 525 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AL161616.1-201ENST00000611867 286 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AC090607.5-201ENST00000615692 224 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AP001784.1-201ENST00000624107 428 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MAPK10-338ENST00000641647 3362 ntBASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.71□□□□□ -1.5
LYSMD3Q7Z3D4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 HSPA8P4-201ENST00000511877 1920 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-596P-201ENST00000365395 98 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 RNA5SP30-201ENST00000365552 115 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 MIR625-201ENST00000385047 85 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 RPL11P3-201ENST00000395256 523 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 RPL35AP22-201ENST00000436855 335 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 CEACAMP6-201ENST00000452007 574 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.644-201ENST00000459006 113 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 RPL21P6-201ENST00000479171 504 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC018437.1-201ENST00000492214 406 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AL136038.1-201ENST00000497246 351 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-615P-201ENST00000516065 106 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.674-201ENST00000516362 113 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 CDH12P4-201ENST00000517835 295 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 CDH12P3-201ENST00000517935 295 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 CDH12P1-201ENST00000518435 295 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 DEFB108D-201ENST00000527787 222 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC060780.2-201ENST00000589047 198 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC002044.1-201ENST00000606707 158 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AL450472.1-202ENST00000637286 180 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 SRRM1P3-201ENST00000426911 2678 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 AC140479.2-201ENST00000421567 3130 ntBASIC5.7□□□□□ -1.5
LYSMD3Q7Z3D4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC004656.1-201ENST00000568479 4951 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-1081P-201ENST00000384537 107 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 MIR1298-201ENST00000408783 112 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-130P-201ENST00000411112 103 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC069213.2-201ENST00000420238 366 ntBASIC5.69□□□□□ -1.5
LYSMD3Q7Z3D4 AC096920.1-201ENST00000423991 241 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms