Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.05□□□□□ -1.92
NIPAL3Q6P499 AC093010.3-201ENST00000570269 15214 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC005539.1-201ENST00000443768 1479 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC005183.1-201ENST00000603687 1979 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 FRG1BP-201ENST00000278882 761 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 RPL23AP57-201ENST00000332361 466 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 RNU6-560P-201ENST00000364007 108 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 MIR122-201ENST00000385044 85 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 TMEM167AP1-201ENST00000423409 219 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 RPL27AP8-201ENST00000424277 446 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 MTATP6P4-201ENST00000427725 675 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 MTCYBP45-201ENST00000435243 565 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 HMGB3P11-201ENST00000440127 604 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 EEF1A1P39-201ENST00000440791 250 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 ARPC3P5-201ENST00000448802 534 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 RPL26P28-201ENST00000451325 435 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 FAM172BP-201ENST00000487497 1089 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC021146.5-201ENST00000503544 545 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC006499.5-201ENST00000505037 514 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 SNORA70.16-201ENST00000516390 95 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 SNORD59.2-201ENST00000516873 68 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 OR10V3P-201ENST00000525712 725 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.04□□□□□ -1.92
NIPAL3Q6P499 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AL390208.1-201ENST00000605885 644 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AL450489.1-201ENST00000612071 468 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 MIR6076-201ENST00000617521 113 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 AC090897.3-201ENST00000636973 1157 ntBASIC3.04□□□□□ -1.92
NIPAL3Q6P499 ZNF826P-207ENST00000622273 1910 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AC009812.4-201ENST00000569134 1805 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AC004972.1-201ENST00000623934 2209 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 ZNF542P-204ENST00000482727 1305 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 RNA5SP197-201ENST00000363357 119 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 MIR449B-201ENST00000384995 97 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 SNORA48.7-201ENST00000391302 135 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 RPS4XP3-201ENST00000398541 413 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AL136310.1-201ENST00000404926 654 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 MTATP6P20-201ENST00000414147 562 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AL592310.1-201ENST00000414330 671 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 CCDC58P2-201ENST00000417131 366 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 RPS3AP37-201ENST00000419176 745 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 USP9YP36-201ENST00000424581 829 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 THAP5P1-201ENST00000439089 262 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 VN1R34P-201ENST00000447387 883 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AL592447.1-201ENST00000447592 540 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 CYCSP35-201ENST00000451978 304 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 RBMY2UP-201ENST00000453474 324 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AC234775.1-201ENST00000454247 670 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 RPS27P29-201ENST00000463110 252 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AC104164.3-201ENST00000467363 1258 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 RPL30P14-201ENST00000482744 348 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 RPL7P38-201ENST00000488396 739 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AC112198.1-201ENST00000505369 1220 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 FCF1P8-201ENST00000510322 597 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AC006499.2-201ENST00000513470 337 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 RNY4P37-201ENST00000516225 96 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 SCARNA20.6-201ENST00000517251 106 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AC093331.1-201ENST00000521474 169 ntBASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.03□□□□□ -1.92
NIPAL3Q6P499 AL512347.1-201ENST00000566420 503 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms