Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 U3.26-201ENST00000391236 204 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AP002784.2-201ENST00000397300 549 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AL139098.1-201ENST00000407291 389 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 ATG3P1-201ENST00000419507 911 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 COTL1P1-201ENST00000422309 375 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 OR2AS1P-201ENST00000427827 319 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC005345.1-201ENST00000431868 217 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC010374.2-201ENST00000512933 535 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 RNA5SP217-201ENST00000515959 91 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 RNU1-143P-201ENST00000516296 146 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AP001207.2-201ENST00000519490 539 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AP003168.1-201ENST00000530091 307 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC007536.1-201ENST00000533382 349 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 MTCO1P40-201ENST00000574371 625 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC133794.1-201ENST00000602731 914 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 U1.23-201ENST00000610293 146 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 RNU1-68P-201ENST00000615382 146 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC006249.1-201ENST00000621223 471 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 U1.39-201ENST00000621562 146 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC090617.7-201ENST00000623952 126 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AP000676.4-201ENST00000624659 623 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 AC091925.2-201ENST00000625059 256 ntBASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.8□□□□□ -1.96
H3F3CQ6NXT2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 FAM35BP-202ENST00000497389 3337 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 GDI2P1-201ENST00000429312 1336 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 U3.6-201ENST00000363622 211 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 OR1L1-202ENST00000373686 1083 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 RNA5SP252-201ENST00000391131 119 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AL122016.1-201ENST00000403365 367 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 RPL5P18-201ENST00000406671 891 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 RPL32P35-201ENST00000415214 394 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 MTATP6P11-201ENST00000428071 670 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 SAR1AP4-201ENST00000429225 591 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC011242.1-201ENST00000433596 1158 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 SETP8-201ENST00000435341 628 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 YWHAZP7-201ENST00000436906 631 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 OR6K5P-201ENST00000447050 945 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC112492.1-201ENST00000449607 712 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC078857.1-201ENST00000469870 667 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC117440.1-201ENST00000474107 571 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC118282.2-201ENST00000508739 374 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 MTND2P31-201ENST00000512602 616 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 RNU6-1095P-201ENST00000516148 108 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 RNU6-334P-201ENST00000517072 102 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC245036.5-201ENST00000596330 847 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AL137843.1-201ENST00000605078 385 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AL353748.2-201ENST00000622148 471 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 AC073348.1-201ENST00000623002 331 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.79□□□□□ -1.96
H3F3CQ6NXT2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 AC096644.4-201ENST00000563417 2912 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 RNU6-851P-201ENST00000384565 107 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 AL031121.1-201ENST00000406553 254 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 BX664727.1-201ENST00000416024 466 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 DEFB130D-201ENST00000426866 237 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 RPL31P54-201ENST00000429803 370 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 AL139132.1-201ENST00000431587 344 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 AC004866.2-201ENST00000438285 481 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 RPL23AP58-201ENST00000440453 469 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 AL831737.1-201ENST00000441288 271 ntBASIC2.78□□□□□ -1.96
H3F3CQ6NXT2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms