Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 Y_RNA.277-201ENST00000364754 102 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 MIR191-201ENST00000384873 92 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 MRPL35P1-201ENST00000404272 572 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 U3.43-201ENST00000410734 213 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 Y_RNA.793-201ENST00000411222 111 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AC063979.1-201ENST00000415539 377 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 MTCO3P29-201ENST00000432119 779 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AL159987.2-201ENST00000432754 307 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AL034369.1-201ENST00000453808 477 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 GAPDHP53-201ENST00000458397 924 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 Y_RNA.644-201ENST00000459006 113 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 PPIAP21-201ENST00000464473 501 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 RN7SL741P-201ENST00000482473 289 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 OR9A1P-202ENST00000484361 945 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AC074250.1-201ENST00000511117 192 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 Y_RNA.674-201ENST00000516362 113 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 Y_RNA.713-201ENST00000517013 96 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 MIR3189-201ENST00000578735 73 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 MIR132-201ENST00000591554 101 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AC243829.7-201ENST00000633081 225 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 MIR4496-201ENST00000635896 61 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AL596275.2-204ENST00000641628 552 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 AL596275.2-206ENST00000641957 626 ntBASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.65□□□□□ -1.67
CDPF1Q6NVV7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 RNA5SP472-201ENST00000363868 119 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 RN7SKP171-201ENST00000364417 303 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 RNU6-125P-201ENST00000384505 107 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 MIR188-201ENST00000385034 86 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 SNORA68.2-201ENST00000391263 128 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AL133388.1-201ENST00000404509 287 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 MIR1250-201ENST00000408098 113 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 MIR1298-201ENST00000408783 112 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 RN7SKP205-201ENST00000410999 307 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 PTPN2P1-201ENST00000423212 1072 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC008065.1-201ENST00000428525 348 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC092573.2-201ENST00000434546 243 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AL513124.1-201ENST00000450410 614 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC005517.1-201ENST00000452091 489 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 RPL23AP2-201ENST00000471227 466 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC044810.1-201ENST00000480271 711 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 TOMM22P4-201ENST00000511318 336 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 RNU6-1338P-201ENST00000516328 91 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC091144.1-201ENST00000519573 138 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AC138207.8-204ENST00000579588 527 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AL035410.2-201ENST00000604963 864 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 MRPL57P3-201ENST00000619218 176 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 SAGE2P-201ENST00000420011 2126 ntBASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CDPF1Q6NVV7 AL672167.1-205ENST00000641112 3080 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms