Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 HLA-N-201ENST00000437516 135 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 ANP32BP2-201ENST00000454525 545 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 GAPDHP56-201ENST00000506031 988 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 RPL37P25-201ENST00000507308 276 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 RNU6-430P-201ENST00000517078 107 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 CDH12P4-201ENST00000517835 295 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 CDH12P3-201ENST00000517935 295 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 CDH12P1-201ENST00000518435 295 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC055876.1-202ENST00000567053 138 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 MIR4270-201ENST00000581799 70 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AL161729.4-201ENST00000604650 476 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC004696.1-201ENST00000614345 607 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 uc_338.12-201ENST00000616344 181 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC099842.1-201ENST00000619919 596 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC084035.1-201ENST00000634543 607 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 FARSBP1-201ENST00000435808 1778 ntBASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PPP4R4Q6NUP7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 SDAD1P1-202ENST00000524156 2051 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AP001148.1-201ENST00000624124 2359 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 ZFRP1-201ENST00000457579 2970 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 RNU5A-1-201ENST00000362698 116 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 SNORD74.4-201ENST00000364129 80 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 MIR513A2-201ENST00000385249 127 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 RNU1-82P-201ENST00000390851 165 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 C1DP2-201ENST00000418167 426 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AL645608.4-201ENST00000423619 154 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC019097.1-201ENST00000424783 735 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 NANOGP6-201ENST00000429190 847 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC104850.1-201ENST00000435940 476 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 MTND1P12-201ENST00000455231 147 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 RPL23AP56-201ENST00000460778 453 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 RPS15AP36-201ENST00000492022 382 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC138853.1-201ENST00000503549 823 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 CYP4A43P-201ENST00000568156 121 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC137800.2-201ENST00000574375 120 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC068790.2-201ENST00000602601 557 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC121334.2-201ENST00000605387 271 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 AC091834.1-201ENST00000614543 472 ntBASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.34□□□□□ -1.71
PPP4R4Q6NUP7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.34□□□□□ -1.72
PPP4R4Q6NUP7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PPP4R4Q6NUP7 AC090740.1-201ENST00000623193 2262 ntBASIC4.34□□□□□ -1.72
PPP4R4Q6NUP7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.34□□□□□ -1.72
PPP4R4Q6NUP7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.34□□□□□ -1.72
PPP4R4Q6NUP7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.72
PPP4R4Q6NUP7 AC118273.1-201ENST00000525324 3006 ntBASIC4.34□□□□□ -1.72
PPP4R4Q6NUP7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.34□□□□□ -1.72
PPP4R4Q6NUP7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 OR56B2P-202ENST00000641377 2453 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 ZNF807-201ENST00000328088 1707 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 Y_RNA.505-201ENST00000384489 102 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 Y_RNA.517-201ENST00000384551 106 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 RPL23AP32-201ENST00000395315 459 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AL591034.1-201ENST00000407447 340 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms