Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RMST_2.1-201ENST00000617263 136 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
VPS13DQ5THJ4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 AC026241.1-201ENST00000517873 2142 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 RPS15AP12-201ENST00000419498 388 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 RPS29P12-201ENST00000460178 152 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 AL139811.1-201ENST00000424779 2299 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 AC011352.3-201ENST00000505162 593 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 MTND5P21-201ENST00000531961 522 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 AC005539.1-201ENST00000443768 1479 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 AL590084.1-201ENST00000407885 387 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 ARL2BPP2-201ENST00000550907 489 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 AC010546.1-201ENST00000569391 485 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 MIR6132-201ENST00000622083 109 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS13DQ5THJ4 RNU4-62P-201ENST00000410125 130 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 CR769767.1-201ENST00000436337 346 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 HMGB1P31-201ENST00000437242 427 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 CBWD4P-201ENST00000445695 655 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 HMGB3P15-201ENST00000507326 574 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 TTC39CP1-201ENST00000512513 755 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 RPL23AP61-201ENST00000623642 466 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 WWP1P1-201ENST00000466609 2769 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AP000852.1-201ENST00000472460 573 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 MIR6895-201ENST00000613497 78 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AC110774.1-201ENST00000623567 2018 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 U8.9-201ENST00000365667 134 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 RNU6-356P-201ENST00000384140 107 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 HMGN2P35-201ENST00000412164 270 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 RN7SKP96-201ENST00000516948 297 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 FAM35CP-201ENST00000554755 2470 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 AC004520.1-201ENST00000608362 1413 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 RPL7P46-201ENST00000425129 740 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 MIR8081-201ENST00000611533 95 ntBASIC1.31□□□□□ -2.2
VPS13DQ5THJ4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC234782.4-201ENST00000417646 1048 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 RPL23AP63-201ENST00000498752 471 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC034244.1-201ENST00000507687 207 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 PSMA6P4-201ENST00000603247 718 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AP001148.1-201ENST00000624124 2359 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 MTCO1P14-201ENST00000441695 1559 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AL353746.1-201ENST00000566293 6881 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 MIR378A-201ENST00000362177 66 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC027124.2-201ENST00000428249 105 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 USP9YP15-201ENST00000442391 422 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC027673.1-201ENST00000456245 405 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 XIST_intron.1-201ENST00000619444 68 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms