Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC017083.1-201ENST00000428093 483 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 COX6B1P7-201ENST00000430845 235 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AL122001.1-201ENST00000457027 370 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 RPS23P7-201ENST00000466210 444 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC007537.2-201ENST00000472093 511 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC092451.1-201ENST00000480211 153 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC108475.1-201ENST00000507880 950 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC117532.1-201ENST00000514638 323 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 RPL23AP87-202ENST00000573039 466 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 MIR5697-201ENST00000578045 78 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC023043.4-201ENST00000612081 449 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 AL158063.1-201ENST00000615349 536 ntBASIC4.18□□□□□ -1.74
CCDC38Q502W7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC38Q502W7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC38Q502W7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC38Q502W7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC38Q502W7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC38Q502W7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC38Q502W7 U3.4-201ENST00000363352 213 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 RNU4-91P-201ENST00000364778 135 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 RNU6-637P-201ENST00000384050 107 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AL136372.1-201ENST00000403060 228 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 HSPE1P26-201ENST00000405341 275 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 RNU4-25P-201ENST00000410569 230 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 RN7SKP182-201ENST00000410772 298 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC233728.2-201ENST00000425348 757 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 SNRPGP9-201ENST00000456025 225 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 RPL23AP31-201ENST00000456160 467 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AL136097.1-201ENST00000456945 913 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 RN7SL93P-201ENST00000463035 293 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 RPL21P104-201ENST00000464143 478 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC068587.1-201ENST00000483613 781 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 RPL23AP41-201ENST00000484754 458 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC026979.1-201ENST00000492525 396 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC080014.1-201ENST00000496877 1201 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC026801.2-201ENST00000515352 425 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 RNU7-143P-201ENST00000516781 65 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC012443.1-201ENST00000605605 231 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC068276.1-201ENST00000605793 379 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 OR10AB1P-201ENST00000609613 938 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC006338.2-201ENST00000616864 791 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC104010.1-201ENST00000616889 150 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 AC048344.4-201ENST00000619744 527 ntBASIC4.17□□□□□ -1.74
CCDC38Q502W7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC38Q502W7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CCDC38Q502W7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC38Q502W7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC38Q502W7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC38Q502W7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 Y_RNA.46-201ENST00000362695 102 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 RNA5SP366-201ENST00000365454 123 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 SNORD115.1-201ENST00000391109 76 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 RPS20P2-201ENST00000402520 389 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 RPS3AP24-201ENST00000407896 734 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 RNU6-516P-201ENST00000411381 104 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC006011.1-201ENST00000442758 349 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC239367.2-201ENST00000447309 705 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AL590365.1-201ENST00000450788 243 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 MTCO3P20-201ENST00000454926 688 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 SNRPFP4-201ENST00000456366 242 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 RNA5SP246-201ENST00000458909 119 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 RNA5SP269-201ENST00000459032 137 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 MTND5P13-201ENST00000513046 1079 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 FABP5P5-201ENST00000515537 406 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 RNU6-201P-201ENST00000517100 61 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 HMGN1P28-201ENST00000521340 364 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms