Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC091979.2-201ENST00000607514 214 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSRP1Q08945 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SSRP1Q08945 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SSRP1Q08945 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.09□□□□□ -1.59
SSRP1Q08945 AP000346.3-201ENST00000622821 210 ntBASIC5.09□□□□□ -1.59
SSRP1Q08945 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.09□□□□□ -1.59
SSRP1Q08945 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.09□□□□□ -1.59
SSRP1Q08945 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
SSRP1Q08945 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
SSRP1Q08945 DDX18P3-201ENST00000404856 2007 ntBASIC5.09□□□□□ -1.6
SSRP1Q08945 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSRP1Q08945 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.08□□□□□ -1.6
SSRP1Q08945 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.08□□□□□ -1.6
SSRP1Q08945 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSRP1Q08945 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSRP1Q08945 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSRP1Q08945 AC025031.4-201ENST00000621248 3271 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
SSRP1Q08945 MIR1911-201ENST00000410783 80 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.08□□□□□ -1.6
SSRP1Q08945 AL807761.1-201ENST00000417622 171 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.08□□□□□ -1.6
SSRP1Q08945 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.08□□□□□ -1.6
SSRP1Q08945 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.08□□□□□ -1.6
SSRP1Q08945 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.08□□□□□ -1.6
SSRP1Q08945 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.08□□□□□ -1.6
SSRP1Q08945 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.08□□□□□ -1.6
SSRP1Q08945 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.08□□□□□ -1.6
SSRP1Q08945 AC140076.1-201ENST00000449897 361 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 MTND3P10-201ENST00000450967 341 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.08□□□□□ -1.6
SSRP1Q08945 RNU6-420P-201ENST00000458780 107 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AL049714.1-201ENST00000466686 347 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 RPL35AP15-201ENST00000468042 339 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.08□□□□□ -1.6
SSRP1Q08945 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.08□□□□□ -1.6
SSRP1Q08945 RNU6-358P-201ENST00000516564 75 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 OR4R3P-201ENST00000525084 838 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.08□□□□□ -1.6
SSRP1Q08945 AL133271.1-201ENST00000538229 291 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AL133153.1-201ENST00000557756 303 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.08□□□□□ -1.6
SSRP1Q08945 MIR4715-201ENST00000584117 79 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC105224.1-201ENST00000587055 421 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC098848.2-201ENST00000588023 330 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC234771.5-201ENST00000600161 514 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 BNIP3P30-201ENST00000601184 574 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC006254.3-201ENST00000603353 884 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AC025449.1-201ENST00000603896 529 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 Z84480.1-201ENST00000605131 311 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 AL020991.1-201ENST00000612314 373 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.08□□□□□ -1.6
SSRP1Q08945 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SSRP1Q08945 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSRP1Q08945 AC104118.1-201ENST00000607625 1589 ntBASIC5.08□□□□□ -1.6
SSRP1Q08945 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.07□□□□□ -1.6
SSRP1Q08945 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 OR5P1P-201ENST00000299512 925 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AC067945.1-201ENST00000342609 618 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 MIR331-201ENST00000362302 94 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.07□□□□□ -1.6
SSRP1Q08945 RAP1BP3-201ENST00000407180 549 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 RPS3AP24-201ENST00000407896 734 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 PDSS1P1-201ENST00000422953 1114 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.07□□□□□ -1.6
SSRP1Q08945 OR4K11P-201ENST00000431829 904 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 RPL23AP30-201ENST00000432419 501 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 RPL35AP22-201ENST00000436855 335 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 PPIAP3-201ENST00000450588 505 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 FDX1P2-201ENST00000450769 375 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.07□□□□□ -1.6
SSRP1Q08945 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.07□□□□□ -1.6
SSRP1Q08945 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.07□□□□□ -1.6
SSRP1Q08945 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.07□□□□□ -1.6
SSRP1Q08945 SCARNA24.1-201ENST00000516465 137 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.07□□□□□ -1.6
SSRP1Q08945 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 AP001429.1-201ENST00000602568 530 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 AL158211.4-201ENST00000606988 584 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AC090948.1-201ENST00000607464 549 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms