Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH1Q08174 AL137003.2-201ENST00000606924 2538 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 RNU6-490P-201ENST00000362985 107 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 Y_RNA.153-201ENST00000363615 91 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 Y_RNA.473-201ENST00000384333 102 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 RNA5SP241-201ENST00000391326 114 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 NDUFS5P1-201ENST00000405668 289 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 RN7SKP293-201ENST00000411389 296 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 OR6E1P-201ENST00000414424 923 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH1Q08174 SRSF1P1-201ENST00000424058 520 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AL590632.1-201ENST00000424289 371 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AC008267.5-201ENST00000424928 265 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AC236972.1-201ENST00000433225 199 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AL353597.2-202ENST00000434901 373 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH1Q08174 HMGB1P12-201ENST00000438594 598 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 EEF1B2P6-201ENST00000445713 673 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 FABP5P13-201ENST00000452144 328 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AC008481.1-201ENST00000463278 396 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AC010683.1-201ENST00000473673 378 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 RN7SL273P-201ENST00000481561 299 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH1Q08174 AC110794.1-201ENST00000505816 425 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH1Q08174 AC021146.3-201ENST00000511911 260 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 RNU6-470P-201ENST00000515954 104 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 RNU6-1332P-201ENST00000516666 104 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 RNU6-699P-201ENST00000517081 110 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 IGKV2D-36-201ENST00000518643 226 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH1Q08174 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH1Q08174 AC113195.1-201ENST00000579952 141 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDH1Q08174 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH1Q08174 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH1Q08174 AL031176.1-201ENST00000604554 466 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 RN7SL787P-201ENST00000613000 284 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 AC110801.1-201ENST00000623590 212 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH1Q08174 AL359893.1-201ENST00000447628 1580 ntBASIC5.23□□□□□ -1.57
PCDH1Q08174 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDH1Q08174 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
PCDH1Q08174 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH1Q08174 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDH1Q08174 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH1Q08174 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDH1Q08174 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDH1Q08174 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
PCDH1Q08174 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDH1Q08174 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PCDH1Q08174 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH1Q08174 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH1Q08174 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH1Q08174 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH1Q08174 SNORA63.7-201ENST00000365579 123 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDH1Q08174 RNU6-26P-201ENST00000383985 107 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 RNU6-434P-201ENST00000384376 107 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH1Q08174 RN7SKP286-201ENST00000410894 299 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDH1Q08174 RPL7P37-201ENST00000425095 738 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH1Q08174 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH1Q08174 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH1Q08174 GAPDHP25-201ENST00000447061 1001 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AC105399.1-202ENST00000447303 205 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 GAPDHP27-201ENST00000447427 1020 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AC234775.1-201ENST00000454247 670 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDH1Q08174 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDH1Q08174 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDH1Q08174 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDH1Q08174 RN7SL214P-201ENST00000487317 265 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AP001086.1-201ENST00000494882 321 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH1Q08174 RNU2-69P-201ENST00000516061 100 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 SCARNA21.2-201ENST00000516600 166 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AC009812.2-201ENST00000517657 457 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH1Q08174 OR8R1P-201ENST00000543943 764 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 OR1F2P-201ENST00000570470 933 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AP005403.1-201ENST00000579720 229 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AP000769.2-201ENST00000602344 396 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH1Q08174 AL355812.1-201ENST00000603215 216 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 AC104687.2-201ENST00000604442 342 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 TUG1_2.1-201ENST00000614234 87 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH1Q08174 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDH1Q08174 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH1Q08174 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH1Q08174 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDH1Q08174 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDH1Q08174 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH1Q08174 AC108751.5-201ENST00000492880 1336 ntBASIC5.22□□□□□ -1.57
PCDH1Q08174 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PCDH1Q08174 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCDH1Q08174 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms