Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
TFF3Q07654 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TFF3Q07654 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TFF3Q07654 MAPK10-322ENST00000641485 4530 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TFF3Q07654 RNA5SP393-201ENST00000363423 117 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TFF3Q07654 SNORA51.11-201ENST00000384442 131 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 ANAPC10P1-201ENST00000395991 556 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 RNA5SP338-201ENST00000410495 85 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AC092832.1-201ENST00000422934 400 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.77□□□□□ -2.13
TFF3Q07654 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.77□□□□□ -2.13
TFF3Q07654 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.77□□□□□ -2.13
TFF3Q07654 RPL23AP7-203ENST00000449021 469 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 RPS15AP1-201ENST00000457423 391 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AP000852.1-201ENST00000472460 573 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AC135999.1-201ENST00000478962 479 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AC090255.1-201ENST00000495779 349 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 SNX5P1-201ENST00000505757 1041 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AC239860.2-201ENST00000525886 270 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TFF3Q07654 AP004242.1-201ENST00000533701 349 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.77□□□□□ -2.13
TFF3Q07654 AC110588.1-201ENST00000559699 137 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AMZ2P1-203ENST00000565833 850 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.77□□□□□ -2.13
TFF3Q07654 MIR4498-201ENST00000577599 66 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 AP001004.1-201ENST00000582468 324 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 MIR4278-201ENST00000636094 69 ntBASIC1.77□□□□□ -2.13
TFF3Q07654 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.77□□□□□ -2.13
TFF3Q07654 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TFF3Q07654 MTCO1P6-201ENST00000481192 1384 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TFF3Q07654 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TFF3Q07654 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TFF3Q07654 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TFF3Q07654 HSPE1P26-201ENST00000405341 275 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 MTND1P23-201ENST00000416931 372 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.76□□□□□ -2.13
TFF3Q07654 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.76□□□□□ -2.13
TFF3Q07654 DPPA3P1-201ENST00000448050 469 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 AC025181.1-201ENST00000477507 416 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.76□□□□□ -2.13
TFF3Q07654 HMGB1P1-201ENST00000522557 636 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.76□□□□□ -2.13
TFF3Q07654 AC044913.1-201ENST00000557200 430 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.76□□□□□ -2.13
TFF3Q07654 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.76□□□□□ -2.13
TFF3Q07654 VIS1.1-201ENST00000610517 203 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
TFF3Q07654 AC002064.3-201ENST00000623448 346 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 RPL23AP61-201ENST00000623642 466 ntBASIC1.76□□□□□ -2.13
TFF3Q07654 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TFF3Q07654 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TFF3Q07654 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.76□□□□□ -2.13
TFF3Q07654 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.75□□□□□ -2.13
TFF3Q07654 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.75□□□□□ -2.13
TFF3Q07654 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TFF3Q07654 RNA5SP138-201ENST00000365098 114 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 RNA5SP37-201ENST00000365420 130 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TFF3Q07654 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.75□□□□□ -2.13
TFF3Q07654 Y_RNA.595-201ENST00000410403 105 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 SPA17P1-201ENST00000416656 452 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 ISCA1P6-201ENST00000427740 390 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 AL592045.1-201ENST00000429867 352 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.75□□□□□ -2.13
TFF3Q07654 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.75□□□□□ -2.13
TFF3Q07654 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.75□□□□□ -2.13
TFF3Q07654 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TFF3Q07654 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.75□□□□□ -2.13
TFF3Q07654 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TFF3Q07654 ACTR3BP3-201ENST00000565577 979 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.75□□□□□ -2.13
TFF3Q07654 AC006270.2-201ENST00000578523 652 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 MIR5002-201ENST00000584713 97 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 RPAP2P1-201ENST00000603626 1168 ntBASIC1.75□□□□□ -2.13
TFF3Q07654 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TFF3Q07654 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.74□□□□□ -2.13
TFF3Q07654 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TFF3Q07654 AC103988.1-201ENST00000566382 2177 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TFF3Q07654 RNA5SP160-201ENST00000364866 120 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TFF3Q07654 AP000567.1-201ENST00000406413 156 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 HMGB3P2-201ENST00000411913 584 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
TFF3Q07654 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TFF3Q07654 RPS15AP7-201ENST00000439294 405 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 AL591719.1-201ENST00000444669 744 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 UBE2V2P4-201ENST00000447495 259 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 AL021397.1-201ENST00000451806 248 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 AL445669.2-201ENST00000454425 421 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 HSPE1P22-201ENST00000456856 327 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 RN7SKP210-201ENST00000459176 261 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms