Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
IRF9Q00978 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
IRF9Q00978 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.62□□□□□ -1.67
IRF9Q00978 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
IRF9Q00978 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
IRF9Q00978 MTND5P17-201ENST00000418405 1603 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
IRF9Q00978 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
IRF9Q00978 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.61□□□□□ -1.67
IRF9Q00978 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.61□□□□□ -1.67
IRF9Q00978 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
IRF9Q00978 RNU4-73P-201ENST00000363164 141 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 RNU1-20P-201ENST00000363314 162 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 RNA5SP151-201ENST00000365632 117 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.61□□□□□ -1.67
IRF9Q00978 Y_RNA.535-201ENST00000384612 99 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 RNU6-332P-201ENST00000391193 108 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 RNU4-65P-201ENST00000410473 140 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 RN7SKP159-201ENST00000410657 292 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 PDCL2P1-201ENST00000419302 352 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 BEND7P1-201ENST00000422058 457 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.61□□□□□ -1.67
IRF9Q00978 CEACAMP7-201ENST00000444105 496 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.61□□□□□ -1.67
IRF9Q00978 PPIAP3-201ENST00000450588 505 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 RPS29P15-201ENST00000458329 171 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 RN7SL329P-201ENST00000467740 299 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.61□□□□□ -1.67
IRF9Q00978 AC103843.2-201ENST00000530523 682 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
IRF9Q00978 AC023050.3-201ENST00000541142 333 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.61□□□□□ -1.67
IRF9Q00978 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.61□□□□□ -1.67
IRF9Q00978 AL390726.5-202ENST00000564800 256 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 ATP5J2P6-201ENST00000565203 266 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.61□□□□□ -1.67
IRF9Q00978 AC091905.4-201ENST00000623432 202 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 AC099654.10-201ENST00000640395 161 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
IRF9Q00978 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
IRF9Q00978 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
IRF9Q00978 PCAT14-202ENST00000627127 3935 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 ASNSP3-201ENST00000451989 1306 ntBASIC4.61□□□□□ -1.67
IRF9Q00978 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.61□□□□□ -1.67
IRF9Q00978 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
IRF9Q00978 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
IRF9Q00978 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
IRF9Q00978 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.6□□□□□ -1.67
IRF9Q00978 EOGT-210ENST00000615922 1931 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.6□□□□□ -1.67
IRF9Q00978 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
IRF9Q00978 AC073343.1-201ENST00000328239 651 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
IRF9Q00978 RN7SKP224-201ENST00000364140 325 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 SNORD81.2-201ENST00000365153 76 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 RNU6-356P-201ENST00000384140 107 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.6□□□□□ -1.67
IRF9Q00978 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 RNU6-193P-201ENST00000410977 107 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 RN7SKP263-201ENST00000411194 309 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 EEF1A1P40-201ENST00000412883 573 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AL591848.1-201ENST00000413092 322 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC009161.1-201ENST00000417306 376 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 AL137014.1-201ENST00000420490 1226 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC016712.1-201ENST00000431088 378 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 RPL7P12-201ENST00000446719 750 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.6□□□□□ -1.67
IRF9Q00978 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 RPL21P103-201ENST00000479921 488 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 RN7SL817P-201ENST00000480777 288 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 RPL7P23-201ENST00000493874 747 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 RN7SL591P-201ENST00000496150 292 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC025164.1-201ENST00000496249 478 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC021146.3-201ENST00000511911 260 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.6□□□□□ -1.67
IRF9Q00978 RNU4-29P-201ENST00000515943 174 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 RN7SKP219-201ENST00000516825 296 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 SUMO2P20-201ENST00000520803 283 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.6□□□□□ -1.67
IRF9Q00978 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 PSMA2P1-201ENST00000526365 646 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
IRF9Q00978 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 RPL21P7-201ENST00000557463 483 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.6□□□□□ -1.67
IRF9Q00978 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 RPS3AP23-202ENST00000574601 686 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 MIR4775-201ENST00000581168 75 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC087763.1-201ENST00000603391 286 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC099669.2-201ENST00000616549 437 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC079684.1-201ENST00000621405 437 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AP002799.1-201ENST00000623552 423 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 FRG1KP-201ENST00000623592 341 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC090617.10-201ENST00000624308 134 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms