Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR5089-201ENST00000580047 84 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 AC012360.2-201ENST00000609349 391 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
HSPG2P98160 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
HSPG2P98160 AC009969.1-201ENST00000438726 172 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.24□□□□□ -2.21
HSPG2P98160 HMGB1P1-201ENST00000522557 636 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 AC011604.1-201ENST00000545978 196 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 PSMA3P-201ENST00000555485 635 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 SNRPGP19-201ENST00000603826 189 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 BX664608.1-201ENST00000610519 487 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.24□□□□□ -2.21
HSPG2P98160 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HSPG2P98160 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HSPG2P98160 GZMAP1-201ENST00000503054 631 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.24□□□□□ -2.21
HSPG2P98160 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.24□□□□□ -2.21
HSPG2P98160 AC012119.1-201ENST00000603184 222 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 PSMA6P4-201ENST00000603247 718 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.24□□□□□ -2.21
HSPG2P98160 RNU6-53P-201ENST00000365367 106 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HSPG2P98160 AL627390.1-201ENST00000396055 340 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.24□□□□□ -2.21
HSPG2P98160 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.24□□□□□ -2.21
HSPG2P98160 RNA5SP102-201ENST00000516865 106 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 AC135279.1-201ENST00000543493 504 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.24□□□□□ -2.21
HSPG2P98160 AC091834.1-201ENST00000614543 472 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.24□□□□□ -2.21
HSPG2P98160 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.23□□□□□ -2.21
HSPG2P98160 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HSPG2P98160 AC093151.1-201ENST00000427711 313 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 TPMTP1-201ENST00000592307 737 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.23□□□□□ -2.21
HSPG2P98160 AL160237.3-201ENST00000604114 1013 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.23□□□□□ -2.21
HSPG2P98160 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HSPG2P98160 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.23□□□□□ -2.21
HSPG2P98160 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.23□□□□□ -2.21
HSPG2P98160 MIR6132-201ENST00000622083 109 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HSPG2P98160 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
HSPG2P98160 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HSPG2P98160 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.23□□□□□ -2.21
HSPG2P98160 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.23□□□□□ -2.21
HSPG2P98160 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.23□□□□□ -2.21
HSPG2P98160 MTND2P29-201ENST00000438595 412 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 AC140059.1-201ENST00000489238 361 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.23□□□□□ -2.21
HSPG2P98160 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
HSPG2P98160 IGHV3-76-201ENST00000522465 295 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 AP000889.2-201ENST00000532684 490 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.23□□□□□ -2.21
HSPG2P98160 AC131902.3-201ENST00000611767 581 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 AP006248.2-201ENST00000623309 592 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 AP003499.2-201ENST00000624100 483 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 AL359740.1-201ENST00000624340 592 ntBASIC1.23□□□□□ -2.21
HSPG2P98160 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HSPG2P98160 Y_RNA.191-201ENST00000363972 113 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-1-201ENST00000383898 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 SNORD21-201ENST00000383953 95 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-42P-201ENST00000384165 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-36P-201ENST00000384172 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-4P-201ENST00000384205 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-5P-201ENST00000384238 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-3P-201ENST00000384314 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-2-201ENST00000384627 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-9-201ENST00000384776 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-33P-201ENST00000384793 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 AC091544.1-201ENST00000484702 348 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 MTCYBP19-201ENST00000517463 1124 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 RNU6-6P-201ENST00000606623 107 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 MIR3199-2-201ENST00000636243 86 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
HSPG2P98160 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.22□□□□□ -2.21
HSPG2P98160 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.22□□□□□ -2.21
HSPG2P98160 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
HSPG2P98160 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
HSPG2P98160 DHFRP5-201ENST00000406944 564 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HSPG2P98160 CBX3P4-201ENST00000538909 354 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 AC008015.1-201ENST00000555505 465 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HSPG2P98160 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HSPG2P98160 AC009501.3-201ENST00000605001 1352 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 AL391987.6-201ENST00000305671 199 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.22□□□□□ -2.21
HSPG2P98160 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.22□□□□□ -2.21
HSPG2P98160 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.22□□□□□ -2.21
HSPG2P98160 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.22□□□□□ -2.21
HSPG2P98160 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.22□□□□□ -2.21
HSPG2P98160 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.22□□□□□ -2.21
HSPG2P98160 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
HSPG2P98160 NCSTNP1-201ENST00000406229 144 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 AIMP1P1-201ENST00000418670 937 ntBASIC1.22□□□□□ -2.21
HSPG2P98160 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.22□□□□□ -2.21
HSPG2P98160 USP9YP8-201ENST00000441913 500 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms