Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 OR5J1P-201ENST00000313544 939 ntBASIC3.95□□□□□ -1.78
RAE1P78406 RNU5A-8P-201ENST00000364102 114 ntBASIC3.95□□□□□ -1.78
RAE1P78406 RNY4P16-201ENST00000364768 94 ntBASIC3.95□□□□□ -1.78
RAE1P78406 Y_RNA.372-201ENST00000365599 102 ntBASIC3.95□□□□□ -1.78
RAE1P78406 Y_RNA.450-201ENST00000384198 113 ntBASIC3.95□□□□□ -1.78
RAE1P78406 MIR19A-201ENST00000384878 82 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AC011933.1-201ENST00000413334 321 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.95□□□□□ -1.78
RAE1P78406 AL391219.1-201ENST00000422570 483 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.95□□□□□ -1.78
RAE1P78406 AC068287.1-201ENST00000430283 295 ntBASIC3.95□□□□□ -1.78
RAE1P78406 MTND1P2-201ENST00000430604 821 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AC119618.1-201ENST00000434191 222 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.95□□□□□ -1.78
RAE1P78406 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.95□□□□□ -1.78
RAE1P78406 USP9YP15-201ENST00000442391 422 ntBASIC3.95□□□□□ -1.78
RAE1P78406 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.95□□□□□ -1.78
RAE1P78406 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 RPS17P13-201ENST00000448974 407 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AC132479.1-201ENST00000449160 144 ntBASIC3.95□□□□□ -1.78
RAE1P78406 PPIAP3-201ENST00000450588 505 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.95□□□□□ -1.78
RAE1P78406 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.95□□□□□ -1.78
RAE1P78406 AC116533.1-201ENST00000459748 321 ntBASIC3.95□□□□□ -1.78
RAE1P78406 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.95□□□□□ -1.78
RAE1P78406 AC007182.2-201ENST00000489251 402 ntBASIC3.95□□□□□ -1.78
RAE1P78406 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 RNU6-528P-201ENST00000516926 100 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.95□□□□□ -1.78
RAE1P78406 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.95□□□□□ -1.78
RAE1P78406 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.95□□□□□ -1.78
RAE1P78406 AC068790.5-201ENST00000602741 355 ntBASIC3.95□□□□□ -1.78
RAE1P78406 OR6R2P-201ENST00000609216 300 ntBASIC3.95□□□□□ -1.78
RAE1P78406 uc_338.12-201ENST00000616344 181 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AC011944.2-201ENST00000624440 683 ntBASIC3.95□□□□□ -1.78
RAE1P78406 LRRC77P-213ENST00000637727 880 ntBASIC3.95□□□□□ -1.78
RAE1P78406 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.95□□□□□ -1.78
RAE1P78406 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 AC068254.2-201ENST00000623938 3577 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AL138713.1-201ENST00000624026 2130 ntBASIC3.95□□□□□ -1.78
RAE1P78406 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
RAE1P78406 AL133243.3-201ENST00000617415 3004 ntBASIC3.95□□□□□ -1.78
RAE1P78406 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.94□□□□□ -1.78
RAE1P78406 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.94□□□□□ -1.78
RAE1P78406 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RAE1P78406 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.94□□□□□ -1.78
RAE1P78406 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RAE1P78406 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RAE1P78406 OR52B1P-201ENST00000316506 909 ntBASIC3.94□□□□□ -1.78
RAE1P78406 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RAE1P78406 MIR448-201ENST00000362131 111 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RNU6-181P-201ENST00000363225 107 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RNU6-263P-201ENST00000363811 107 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RNU6-282P-201ENST00000365357 103 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RNA5SP366-201ENST00000365454 123 ntBASIC3.94□□□□□ -1.78
RAE1P78406 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RAE1P78406 SNORD115-47-201ENST00000391226 86 ntBASIC3.94□□□□□ -1.78
RAE1P78406 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RAE1P78406 RPL7P60-201ENST00000397636 735 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RPS4XP9-201ENST00000405151 780 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AL590002.1-201ENST00000406554 418 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RNA5SP306-201ENST00000411087 107 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.94□□□□□ -1.78
RAE1P78406 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.94□□□□□ -1.78
RAE1P78406 MTCO2P19-201ENST00000427513 598 ntBASIC3.94□□□□□ -1.78
RAE1P78406 FCF1P1-201ENST00000432690 571 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AC002486.1-201ENST00000435098 391 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.94□□□□□ -1.78
RAE1P78406 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.94□□□□□ -1.78
RAE1P78406 AL353748.1-201ENST00000440753 474 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AC006011.1-201ENST00000442758 349 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RAC1P7-201ENST00000445367 377 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AL162388.1-201ENST00000450912 352 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RNA5SP246-201ENST00000458909 119 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RPL5P30-201ENST00000465511 891 ntBASIC3.94□□□□□ -1.78
RAE1P78406 ARL4AP2-201ENST00000507378 601 ntBASIC3.94□□□□□ -1.78
RAE1P78406 FTH1P21-201ENST00000512179 511 ntBASIC3.94□□□□□ -1.78
RAE1P78406 ARL2BPP6-201ENST00000512757 439 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AC010342.1-201ENST00000514047 877 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AC099522.1-202ENST00000514718 367 ntBASIC3.94□□□□□ -1.78
RAE1P78406 RNU6-445P-201ENST00000516949 107 ntBASIC3.94□□□□□ -1.78
RAE1P78406 MYL12AP1-201ENST00000518490 515 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.94□□□□□ -1.78
RAE1P78406 AP003072.2-201ENST00000527756 676 ntBASIC3.94□□□□□ -1.78
RAE1P78406 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.94□□□□□ -1.78
RAE1P78406 TVP23BP1-201ENST00000557500 617 ntBASIC3.94□□□□□ -1.78
RAE1P78406 HMGB1P33-201ENST00000563485 527 ntBASIC3.94□□□□□ -1.78
RAE1P78406 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.94□□□□□ -1.78
RAE1P78406 COX6CP3-201ENST00000580869 223 ntBASIC3.94□□□□□ -1.78
RAE1P78406 MIR4443-201ENST00000585052 53 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AC006504.3-201ENST00000586818 523 ntBASIC3.94□□□□□ -1.78
RAE1P78406 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.94□□□□□ -1.78
RAE1P78406 ELOCP28-201ENST00000590044 317 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms