Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC009237.2-201ENST00000421358 284 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNA1P78396 AL606495.1-201ENST00000422100 813 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AL590664.1-201ENST00000448065 339 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AL162389.1-201ENST00000449233 177 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 snoU109.4-201ENST00000458953 143 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 MTND3P24-201ENST00000506306 329 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AC117522.3-201ENST00000507974 584 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AC034159.1-201ENST00000513885 583 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 RNU6-416P-201ENST00000516265 103 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 FAM60DP-201ENST00000524174 632 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 OR10V3P-201ENST00000525712 725 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.29□□□□□ -1.88
CCNA1P78396 AC079600.2-201ENST00000550076 130 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNA1P78396 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.29□□□□□ -1.88
CCNA1P78396 OR4H6P-202ENST00000603819 340 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AC026790.2-201ENST00000606282 430 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCNA1P78396 SGO1P1-201ENST00000603525 1447 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 AL672167.1-206ENST00000356293 943 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 RNA5SP383-201ENST00000362934 120 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 MIR9-1-201ENST00000385198 89 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 RPL7P8-201ENST00000411964 730 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 AL035407.1-201ENST00000429211 571 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.28□□□□□ -1.88
CCNA1P78396 AL691517.1-201ENST00000440833 1235 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 EEF1B2P7-201ENST00000451177 676 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCNA1P78396 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.28□□□□□ -1.88
CCNA1P78396 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNA1P78396 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNA1P78396 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNA1P78396 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.28□□□□□ -1.88
CCNA1P78396 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.28□□□□□ -1.88
CCNA1P78396 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCNA1P78396 AP000790.1-201ENST00000528891 737 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.28□□□□□ -1.88
CCNA1P78396 AC009318.4-201ENST00000620496 486 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 AC006249.1-201ENST00000621223 471 ntBASIC3.28□□□□□ -1.88
CCNA1P78396 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.28□□□□□ -1.88
CCNA1P78396 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCNA1P78396 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCNA1P78396 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CCNA1P78396 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCNA1P78396 SNORD56.3-201ENST00000363507 71 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 RNU6-799P-201ENST00000363567 107 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 U3.11-201ENST00000364476 212 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 CD24P4-201ENST00000382840 243 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 MIR16-1-201ENST00000385271 89 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 MTND3P20-201ENST00000407663 186 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
CCNA1P78396 OOSP1P1-201ENST00000423265 274 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 TMEM167AP1-201ENST00000423409 219 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.27□□□□□ -1.89
CCNA1P78396 RSL24D1P8-201ENST00000434442 492 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.27□□□□□ -1.89
CCNA1P78396 RNFT1P2-201ENST00000443064 757 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 RPL37P4-201ENST00000448908 268 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.27□□□□□ -1.89
CCNA1P78396 MTCO3P2-201ENST00000457365 171 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.27□□□□□ -1.89
CCNA1P78396 RPL21P47-201ENST00000483696 477 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 AC119751.1-201ENST00000513357 765 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
CCNA1P78396 EEF1B2P4-201ENST00000551398 348 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.27□□□□□ -1.89
CCNA1P78396 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.27□□□□□ -1.89
CCNA1P78396 FAM60BP-201ENST00000578364 658 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 AC245036.5-201ENST00000596330 847 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 AC010738.1-201ENST00000604970 987 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 AC040168.1-201ENST00000623594 991 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 API5P2-201ENST00000397055 1498 ntBASIC3.27□□□□□ -1.89
CCNA1P78396 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCNA1P78396 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.27□□□□□ -1.89
CCNA1P78396 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.26□□□□□ -1.89
CCNA1P78396 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNA1P78396 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNA1P78396 RNU6-859P-201ENST00000362728 107 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 SNORD82-201ENST00000365530 70 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 RNU2-52P-201ENST00000410680 190 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 RNA5SP508-201ENST00000411327 119 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 RPS15AP38-201ENST00000413110 372 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNA1P78396 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.26□□□□□ -1.89
CCNA1P78396 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.26□□□□□ -1.89
CCNA1P78396 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNA1P78396 TPRKBP1-201ENST00000456243 481 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 PABPC1P3-201ENST00000469174 459 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 AC126389.1-201ENST00000477436 290 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 AC015908.1-201ENST00000478739 476 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 RN7SL633P-201ENST00000488974 297 ntBASIC3.26□□□□□ -1.89
CCNA1P78396 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CCNA1P78396 PRELID3BP4-201ENST00000515476 571 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms