Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
TPM4P67936 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.8□□□□□ -1.96
TPM4P67936 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
TPM4P67936 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM4P67936 MIR493-201ENST00000385254 89 ntBASIC2.8□□□□□ -1.96
TPM4P67936 RNU2-25P-201ENST00000411041 191 ntBASIC2.8□□□□□ -1.96
TPM4P67936 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM4P67936 RPL7P30-201ENST00000420888 709 ntBASIC2.8□□□□□ -1.96
TPM4P67936 RPL7P37-201ENST00000425095 738 ntBASIC2.8□□□□□ -1.96
TPM4P67936 AL590762.3-201ENST00000436372 640 ntBASIC2.8□□□□□ -1.96
TPM4P67936 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM4P67936 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM4P67936 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TPM4P67936 AP003102.1-201ENST00000525638 661 ntBASIC2.8□□□□□ -1.96
TPM4P67936 AC027104.1-201ENST00000563702 681 ntBASIC2.8□□□□□ -1.96
TPM4P67936 RPL23AP92-201ENST00000603609 255 ntBASIC2.8□□□□□ -1.96
TPM4P67936 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.8□□□□□ -1.96
TPM4P67936 AC110079.1-202ENST00000635213 138 ntBASIC2.8□□□□□ -1.96
TPM4P67936 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TPM4P67936 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM4P67936 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM4P67936 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM4P67936 MIR144-201ENST00000384886 86 ntBASIC2.79□□□□□ -1.96
TPM4P67936 RNU2-17P-201ENST00000410290 190 ntBASIC2.79□□□□□ -1.96
TPM4P67936 TMEM167AP1-201ENST00000423409 219 ntBASIC2.79□□□□□ -1.96
TPM4P67936 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.79□□□□□ -1.96
TPM4P67936 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM4P67936 MTND2P19-201ENST00000449129 1012 ntBASIC2.79□□□□□ -1.96
TPM4P67936 SNRPGP6-201ENST00000451124 220 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AC104073.1-201ENST00000451988 151 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM4P67936 BX510359.1-201ENST00000456973 237 ntBASIC2.79□□□□□ -1.96
TPM4P67936 FTH1P2-201ENST00000466086 412 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AC017007.3-201ENST00000479865 435 ntBASIC2.79□□□□□ -1.96
TPM4P67936 RPS27P23-201ENST00000487608 251 ntBASIC2.79□□□□□ -1.96
TPM4P67936 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.79□□□□□ -1.96
TPM4P67936 CBX3P3-201ENST00000508108 532 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AC107222.1-201ENST00000510899 637 ntBASIC2.79□□□□□ -1.96
TPM4P67936 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.79□□□□□ -1.96
TPM4P67936 RNA5SP367-201ENST00000516557 118 ntBASIC2.79□□□□□ -1.96
TPM4P67936 RN7SKP40-201ENST00000517211 242 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM4P67936 AP000867.2-201ENST00000532468 320 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM4P67936 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM4P67936 FAM60BP-201ENST00000578364 658 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AC103798.2-201ENST00000624292 632 ntBASIC2.79□□□□□ -1.96
TPM4P67936 AC083865.1-201ENST00000636634 831 ntBASIC2.79□□□□□ -1.96
TPM4P67936 CRYM-AS1-204ENST00000637983 556 ntBASIC2.79□□□□□ -1.96
TPM4P67936 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
TPM4P67936 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TPM4P67936 AL049780.3-201ENST00000624612 1583 ntBASIC2.78□□□□□ -1.96
TPM4P67936 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
TPM4P67936 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
TPM4P67936 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.78□□□□□ -1.96
TPM4P67936 AL513185.3-201ENST00000433335 1300 ntBASIC2.78□□□□□ -1.96
TPM4P67936 ENSAP3-201ENST00000312710 333 ntBASIC2.78□□□□□ -1.96
TPM4P67936 NACA3P-201ENST00000359690 648 ntBASIC2.78□□□□□ -1.96
TPM4P67936 RNA5SP456-201ENST00000364002 114 ntBASIC2.78□□□□□ -1.96
TPM4P67936 SNORA41-201ENST00000384675 132 ntBASIC2.78□□□□□ -1.96
TPM4P67936 MIR627-201ENST00000384979 97 ntBASIC2.78□□□□□ -1.96
TPM4P67936 CYCSP45-201ENST00000402289 315 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AL356057.3-201ENST00000402607 340 ntBASIC2.78□□□□□ -1.96
TPM4P67936 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AC092447.6-201ENST00000414578 210 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AL356320.2-201ENST00000417263 507 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM4P67936 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM4P67936 AC104389.3-201ENST00000445629 235 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.78□□□□□ -1.96
TPM4P67936 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.78□□□□□ -1.96
TPM4P67936 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TPM4P67936 RPL37P25-201ENST00000507308 276 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AC096725.1-201ENST00000514266 313 ntBASIC2.78□□□□□ -1.96
TPM4P67936 RPPH1-2P-201ENST00000516688 293 ntBASIC2.78□□□□□ -1.96
TPM4P67936 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.78□□□□□ -1.96
TPM4P67936 MTCO1P47-201ENST00000523889 1271 ntBASIC2.78□□□□□ -1.96
TPM4P67936 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM4P67936 AC087241.2-201ENST00000535801 324 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AC243972.3-201ENST00000539655 198 ntBASIC2.78□□□□□ -1.96
TPM4P67936 MED28P6-201ENST00000558776 231 ntBASIC2.78□□□□□ -1.96
TPM4P67936 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.78□□□□□ -1.96
TPM4P67936 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM4P67936 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM4P67936 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM4P67936 CYCSP39-201ENST00000565821 309 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AL645944.1-201ENST00000603857 493 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AC006329.2-201ENST00000611491 394 ntBASIC2.78□□□□□ -1.96
TPM4P67936 U4.3-201ENST00000621047 82 ntBASIC2.78□□□□□ -1.96
TPM4P67936 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.78□□□□□ -1.96
TPM4P67936 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TPM4P67936 ZNF519P1-201ENST00000449011 1626 ntBASIC2.78□□□□□ -1.96
TPM4P67936 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.78□□□□□ -1.96
TPM4P67936 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.77□□□□□ -1.97
TPM4P67936 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.77□□□□□ -1.97
TPM4P67936 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
TPM4P67936 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TPM4P67936 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TPM4P67936 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms