Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNA5SP399-201ENST00000364003 117 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.58□□□□□ -1.84
CLDN20P56880 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
CLDN20P56880 RNU6-1207P-201ENST00000384343 107 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN20P56880 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN20P56880 MTCO2P34-201ENST00000421994 607 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 MTND1P28-201ENST00000435623 950 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN20P56880 SKP1P1-201ENST00000438081 489 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 FAM103A2P-201ENST00000444122 354 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN20P56880 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN20P56880 AC012170.1-201ENST00000495139 359 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 NIPA2P2-201ENST00000496376 1083 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN20P56880 AF131216.2-201ENST00000512316 564 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 RNA5SP179-201ENST00000517284 121 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.58□□□□□ -1.84
CLDN20P56880 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN20P56880 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN20P56880 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
CLDN20P56880 SETP7-201ENST00000552169 453 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN20P56880 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN20P56880 AC106785.1-201ENST00000565935 262 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AC022968.1-201ENST00000567372 442 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 MIR5697-201ENST00000578045 78 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 RN7SL703P-201ENST00000578485 302 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AC103987.3-201ENST00000582071 292 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN20P56880 AL020997.2-201ENST00000602607 184 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AC091167.4-201ENST00000605079 184 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AL592436.1-201ENST00000605135 558 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AC011816.2-201ENST00000607089 556 ntBASIC3.58□□□□□ -1.84
CLDN20P56880 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.58□□□□□ -1.84
CLDN20P56880 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLDN20P56880 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN20P56880 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN20P56880 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN20P56880 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN20P56880 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN20P56880 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN20P56880 CCT4P2-201ENST00000233836 1548 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 RNU6-809P-201ENST00000384461 107 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN20P56880 RPL21P32-201ENST00000419877 477 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 RPL17P36-201ENST00000420302 549 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 AC006366.1-201ENST00000422002 759 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN20P56880 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN20P56880 AC108734.1-201ENST00000439549 399 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 RPS29P7-201ENST00000439662 171 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 USP9YP29-201ENST00000445112 563 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 SSXP1-201ENST00000453640 473 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN20P56880 MTCO1P42-201ENST00000457379 726 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 PPIAP15-201ENST00000479662 484 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN20P56880 AC095050.2-201ENST00000510748 1458 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 AC022447.1-201ENST00000515358 464 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN20P56880 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN20P56880 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CLDN20P56880 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN20P56880 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN20P56880 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN20P56880 BNIP3P5-201ENST00000562290 498 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN20P56880 AC090616.5-202ENST00000582111 297 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN20P56880 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN20P56880 HMGN2P28-201ENST00000606102 262 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 AL391261.4-201ENST00000616012 481 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 AC104010.1-201ENST00000616889 150 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 AC092656.1-203ENST00000624134 423 ntBASIC3.57□□□□□ -1.84
CLDN20P56880 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN20P56880 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLDN20P56880 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN20P56880 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN20P56880 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 PRO1804-201ENST00000623780 2050 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CLDN20P56880 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN20P56880 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLDN20P56880 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLDN20P56880 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 RNU6-533P-201ENST00000384144 107 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 SNORD116-4-201ENST00000384733 96 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 MIR1251-201ENST00000408552 70 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN20P56880 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms