Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC004808.1-201ENST00000627671 721 ntBASIC2.95□□□□□ -1.94
PKNOX1P55347 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
PKNOX1P55347 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PKNOX1P55347 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
PKNOX1P55347 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PKNOX1P55347 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PKNOX1P55347 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.95□□□□□ -1.94
PKNOX1P55347 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PKNOX1P55347 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PKNOX1P55347 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 RNU5D-1-201ENST00000363299 116 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 RNU4-51P-201ENST00000364206 140 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 SNORD51-201ENST00000384320 80 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 MIR183-201ENST00000384958 110 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 SNORD67-201ENST00000390833 111 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AL161449.1-201ENST00000414531 1199 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 OR4K6P-201ENST00000416478 897 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AL449283.1-202ENST00000418249 604 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 DUTP6-201ENST00000425573 462 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.94□□□□□ -1.94
PKNOX1P55347 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.94□□□□□ -1.94
PKNOX1P55347 RABEPKP1-201ENST00000440529 1026 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 Z95327.1-201ENST00000446082 482 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 USP9YP34-201ENST00000453983 808 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.94□□□□□ -1.94
PKNOX1P55347 AC091153.1-201ENST00000466297 402 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 HMGN2P13-201ENST00000476476 274 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 MTCYBP16-201ENST00000509187 1129 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.94□□□□□ -1.94
PKNOX1P55347 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.94□□□□□ -1.94
PKNOX1P55347 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.94□□□□□ -1.94
PKNOX1P55347 AC087808.1-201ENST00000520501 361 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PKNOX1P55347 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.94□□□□□ -1.94
PKNOX1P55347 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.94□□□□□ -1.94
PKNOX1P55347 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
PKNOX1P55347 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.94□□□□□ -1.94
PKNOX1P55347 MIR3912-201ENST00000577566 105 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PKNOX1P55347 RN7SL339P-201ENST00000580597 296 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 SNORD84-203ENST00000584275 78 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AP001029.3-201ENST00000588063 596 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AC245036.5-201ENST00000596330 847 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AC078899.3-201ENST00000599065 212 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AC055876.5-201ENST00000605667 259 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 AC069545.1-201ENST00000605671 358 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.94□□□□□ -1.94
PKNOX1P55347 AC023158.2-201ENST00000614876 543 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.94□□□□□ -1.94
PKNOX1P55347 U6.105-201ENST00000637379 88 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 U6.101-201ENST00000637707 76 ntBASIC2.94□□□□□ -1.94
PKNOX1P55347 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PKNOX1P55347 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PKNOX1P55347 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
PKNOX1P55347 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PKNOX1P55347 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PKNOX1P55347 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PKNOX1P55347 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PKNOX1P55347 SNRPEP3-201ENST00000338402 276 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 OR5H2-201ENST00000355273 945 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PKNOX1P55347 Y_RNA.25-201ENST00000362528 102 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.93□□□□□ -1.94
PKNOX1P55347 Y_RNA.408-201ENST00000383987 102 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 SNORA40.2-201ENST00000390847 128 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.93□□□□□ -1.94
PKNOX1P55347 RNU2-42P-201ENST00000410697 113 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 YPEL5P1-201ENST00000419731 367 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 AC007435.1-201ENST00000421086 415 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.93□□□□□ -1.94
PKNOX1P55347 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.93□□□□□ -1.94
PKNOX1P55347 PNPLA4P1-201ENST00000458328 305 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.93□□□□□ -1.94
PKNOX1P55347 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.93□□□□□ -1.94
PKNOX1P55347 AC026412.2-201ENST00000512270 1075 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 RNU6-276P-201ENST00000516114 96 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 RN7SKP31-201ENST00000516354 278 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 AC104986.1-201ENST00000517978 436 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 DUXAP2-201ENST00000519198 589 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.93□□□□□ -1.94
PKNOX1P55347 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.93□□□□□ -1.94
PKNOX1P55347 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.93□□□□□ -1.94
PKNOX1P55347 AC018630.1-201ENST00000541376 925 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.93□□□□□ -1.94
PKNOX1P55347 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.93□□□□□ -1.94
PKNOX1P55347 MIR3158-1-201ENST00000583596 81 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 UBL5P2-201ENST00000583788 219 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.93□□□□□ -1.94
PKNOX1P55347 AC096947.1-201ENST00000603233 470 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 AC005014.3-201ENST00000605985 190 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 AF129408.1-201ENST00000608767 431 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.93□□□□□ -1.94
PKNOX1P55347 MIR7975-201ENST00000619350 68 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.93□□□□□ -1.94
PKNOX1P55347 AC084824.4-201ENST00000620106 731 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 AC120349.2-201ENST00000625002 298 ntBASIC2.93□□□□□ -1.94
PKNOX1P55347 AC099654.8-201ENST00000637757 681 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms