Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
LIM2P55344 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
LIM2P55344 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIM2P55344 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.99□□□□□ -1.93
LIM2P55344 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.99□□□□□ -1.93
LIM2P55344 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.99□□□□□ -1.93
LIM2P55344 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LIM2P55344 OR1S2-201ENST00000302592 978 ntBASIC2.99□□□□□ -1.93
LIM2P55344 U3.6-201ENST00000363622 211 ntBASIC2.99□□□□□ -1.93
LIM2P55344 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.99□□□□□ -1.93
LIM2P55344 RNU6-629P-201ENST00000384061 103 ntBASIC2.99□□□□□ -1.93
LIM2P55344 RNU6-636P-201ENST00000384598 107 ntBASIC2.99□□□□□ -1.93
LIM2P55344 RNU6-906P-201ENST00000384700 70 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
LIM2P55344 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.99□□□□□ -1.93
LIM2P55344 TIMM9P2-201ENST00000419324 266 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AL353678.1-201ENST00000422735 741 ntBASIC2.99□□□□□ -1.93
LIM2P55344 HMGB1P12-201ENST00000438594 598 ntBASIC2.99□□□□□ -1.93
LIM2P55344 ARPC3P5-201ENST00000448802 534 ntBASIC2.99□□□□□ -1.93
LIM2P55344 RPL18AP17-201ENST00000455326 198 ntBASIC2.99□□□□□ -1.93
LIM2P55344 BX510359.1-201ENST00000456973 237 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AC005410.1-202ENST00000460347 485 ntBASIC2.99□□□□□ -1.93
LIM2P55344 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.99□□□□□ -1.93
LIM2P55344 AC068305.1-201ENST00000497406 726 ntBASIC2.99□□□□□ -1.93
LIM2P55344 RPL23AP55-201ENST00000498163 452 ntBASIC2.99□□□□□ -1.93
LIM2P55344 RNU6-583P-201ENST00000516012 92 ntBASIC2.99□□□□□ -1.93
LIM2P55344 RN7SKP244-201ENST00000516513 307 ntBASIC2.99□□□□□ -1.93
LIM2P55344 SNORA31.20-201ENST00000517111 133 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AC245166.1-201ENST00000521012 253 ntBASIC2.99□□□□□ -1.93
LIM2P55344 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
LIM2P55344 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.99□□□□□ -1.93
LIM2P55344 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.99□□□□□ -1.93
LIM2P55344 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.99□□□□□ -1.93
LIM2P55344 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.99□□□□□ -1.93
LIM2P55344 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.99□□□□□ -1.93
LIM2P55344 LARP7P2-201ENST00000575306 125 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.99□□□□□ -1.93
LIM2P55344 AC012468.1-201ENST00000604888 430 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AC007179.3-201ENST00000604976 235 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AL591516.1-201ENST00000611326 274 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AC243773.3-201ENST00000613270 256 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AC100793.4-201ENST00000613683 429 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AC107075.1-201ENST00000613695 314 ntBASIC2.99□□□□□ -1.93
LIM2P55344 AC091046.2-201ENST00000620775 665 ntBASIC2.99□□□□□ -1.93
LIM2P55344 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.99□□□□□ -1.93
LIM2P55344 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.99□□□□□ -1.93
LIM2P55344 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LIM2P55344 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
LIM2P55344 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.98□□□□□ -1.93
LIM2P55344 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.98□□□□□ -1.93
LIM2P55344 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LIM2P55344 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LIM2P55344 AL021368.2-201ENST00000606125 5352 ntBASIC2.98□□□□□ -1.93
LIM2P55344 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
LIM2P55344 SNORD6-201ENST00000365444 73 ntBASIC2.98□□□□□ -1.93
LIM2P55344 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.98□□□□□ -1.93
LIM2P55344 Y_RNA.465-201ENST00000384293 102 ntBASIC2.98□□□□□ -1.93
LIM2P55344 SNRPEP2-201ENST00000397592 279 ntBASIC2.98□□□□□ -1.93
LIM2P55344 CYCSP45-201ENST00000402289 315 ntBASIC2.98□□□□□ -1.93
LIM2P55344 RNU6-712P-201ENST00000410558 100 ntBASIC2.98□□□□□ -1.93
LIM2P55344 RNU2-15P-201ENST00000410692 191 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC007899.1-201ENST00000412776 775 ntBASIC2.98□□□□□ -1.93
LIM2P55344 RPL32P35-201ENST00000415214 394 ntBASIC2.98□□□□□ -1.93
LIM2P55344 VDAC1P3-201ENST00000434069 851 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AL645638.1-201ENST00000440519 361 ntBASIC2.98□□□□□ -1.93
LIM2P55344 RNU7-170P-201ENST00000459303 61 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC010285.1-201ENST00000470580 392 ntBASIC2.98□□□□□ -1.93
LIM2P55344 ST13P14-201ENST00000474095 734 ntBASIC2.98□□□□□ -1.93
LIM2P55344 OR4G11P-201ENST00000492842 939 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AL024509.2-201ENST00000493462 493 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC093278.1-201ENST00000494700 600 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.98□□□□□ -1.93
LIM2P55344 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.98□□□□□ -1.93
LIM2P55344 AC026412.2-201ENST00000512270 1075 ntBASIC2.98□□□□□ -1.93
LIM2P55344 PHBP14-201ENST00000512887 367 ntBASIC2.98□□□□□ -1.93
LIM2P55344 RNU6-27P-201ENST00000516146 107 ntBASIC2.98□□□□□ -1.93
LIM2P55344 SNORA70.14-201ENST00000516205 110 ntBASIC2.98□□□□□ -1.93
LIM2P55344 MTND2P32-201ENST00000521584 1038 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.98□□□□□ -1.93
LIM2P55344 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.98□□□□□ -1.93
LIM2P55344 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.98□□□□□ -1.93
LIM2P55344 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.98□□□□□ -1.93
LIM2P55344 AC009712.1-201ENST00000564938 316 ntBASIC2.98□□□□□ -1.93
LIM2P55344 MTCO2P2-201ENST00000591258 225 ntBASIC2.98□□□□□ -1.93
LIM2P55344 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.98□□□□□ -1.93
LIM2P55344 AC011816.2-201ENST00000607089 556 ntBASIC2.98□□□□□ -1.93
LIM2P55344 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.98□□□□□ -1.93
LIM2P55344 VIS1.1-201ENST00000610517 203 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC025588.4-201ENST00000615802 908 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC018692.3-201ENST00000623929 123 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC091925.2-201ENST00000625059 256 ntBASIC2.98□□□□□ -1.93
LIM2P55344 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.98□□□□□ -1.93
LIM2P55344 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LIM2P55344 AF127577.6-201ENST00000623352 2191 ntBASIC2.98□□□□□ -1.93
LIM2P55344 AC093908.1-201ENST00000623125 8092 ntBASIC2.98□□□□□ -1.93
LIM2P55344 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.98□□□□□ -1.93
LIM2P55344 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.97□□□□□ -1.93
LIM2P55344 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LIM2P55344 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LIM2P55344 AL356473.1-201ENST00000406203 1408 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms