Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH11P55287 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CDH11P55287 RNVU1-3-201ENST00000364313 161 ntBASIC3.46□□□□□ -1.86
CDH11P55287 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH11P55287 RNU6-769P-201ENST00000384407 104 ntBASIC3.46□□□□□ -1.86
CDH11P55287 Y_RNA.493-201ENST00000384422 102 ntBASIC3.46□□□□□ -1.86
CDH11P55287 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CDH11P55287 MIR1305-201ENST00000408300 86 ntBASIC3.46□□□□□ -1.86
CDH11P55287 HMGB1P11-201ENST00000413899 637 ntBASIC3.46□□□□□ -1.86
CDH11P55287 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH11P55287 MORF4L1P6-201ENST00000418771 268 ntBASIC3.46□□□□□ -1.86
CDH11P55287 BX119904.4-201ENST00000424402 301 ntBASIC3.46□□□□□ -1.86
CDH11P55287 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH11P55287 AC010153.1-201ENST00000432862 727 ntBASIC3.46□□□□□ -1.86
CDH11P55287 CKS1BP5-201ENST00000434172 273 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AL360221.1-201ENST00000445989 335 ntBASIC3.46□□□□□ -1.86
CDH11P55287 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH11P55287 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH11P55287 PPIAP3-201ENST00000450588 505 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AL353691.1-201ENST00000451332 387 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AL136097.1-201ENST00000456945 913 ntBASIC3.46□□□□□ -1.86
CDH11P55287 RPS20P24-201ENST00000457473 361 ntBASIC3.46□□□□□ -1.86
CDH11P55287 TPTE2P5-203ENST00000458118 728 ntBASIC3.46□□□□□ -1.86
CDH11P55287 RPL21P11-201ENST00000461458 483 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH11P55287 AC084198.1-201ENST00000477747 402 ntBASIC3.46□□□□□ -1.86
CDH11P55287 RAP1BP2-201ENST00000478270 544 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AL139099.1-201ENST00000497398 403 ntBASIC3.46□□□□□ -1.86
CDH11P55287 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
CDH11P55287 AC022447.3-201ENST00000506865 495 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH11P55287 PTGES3P3-201ENST00000511479 482 ntBASIC3.46□□□□□ -1.86
CDH11P55287 RNA5SP179-201ENST00000517284 121 ntBASIC3.46□□□□□ -1.86
CDH11P55287 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH11P55287 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH11P55287 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH11P55287 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH11P55287 AL121576.1-201ENST00000556055 276 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH11P55287 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH11P55287 AC112187.2-201ENST00000604345 283 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AL137849.1-201ENST00000604767 169 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AC091167.4-201ENST00000605079 184 ntBASIC3.46□□□□□ -1.86
CDH11P55287 AL391497.1-201ENST00000608671 547 ntBASIC3.46□□□□□ -1.86
CDH11P55287 U7.8-201ENST00000619968 63 ntBASIC3.46□□□□□ -1.86
CDH11P55287 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CDH11P55287 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH11P55287 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH11P55287 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH11P55287 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH11P55287 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH11P55287 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH11P55287 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH11P55287 TNPO1P3-201ENST00000436471 2662 ntBASIC3.45□□□□□ -1.86
CDH11P55287 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH11P55287 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDH11P55287 U3.4-201ENST00000363352 213 ntBASIC3.45□□□□□ -1.86
CDH11P55287 Y_RNA.201-201ENST00000364052 96 ntBASIC3.45□□□□□ -1.86
CDH11P55287 SNORD6-201ENST00000365444 73 ntBASIC3.45□□□□□ -1.86
CDH11P55287 SNORD51-201ENST00000384320 80 ntBASIC3.45□□□□□ -1.86
CDH11P55287 Y_RNA.548-201ENST00000384656 105 ntBASIC3.45□□□□□ -1.86
CDH11P55287 MT-TC-201ENST00000387405 66 ntBASIC3.45□□□□□ -1.86
CDH11P55287 MIR1250-201ENST00000408098 113 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH11P55287 MTATP6P27-201ENST00000416987 621 ntBASIC3.45□□□□□ -1.86
CDH11P55287 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH11P55287 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH11P55287 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.45□□□□□ -1.86
CDH11P55287 MRPS18BP2-201ENST00000434310 759 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC007389.2-201ENST00000434630 306 ntBASIC3.45□□□□□ -1.86
CDH11P55287 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 BMI1P1-201ENST00000445879 941 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AP000542.1-201ENST00000448473 371 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 BTF3P5-201ENST00000457252 467 ntBASIC3.45□□□□□ -1.86
CDH11P55287 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 AP002812.1-201ENST00000495378 474 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH11P55287 AC021678.1-201ENST00000505195 936 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC034159.1-201ENST00000513885 583 ntBASIC3.45□□□□□ -1.86
CDH11P55287 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 RN7SKP116-201ENST00000516902 319 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH11P55287 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH11P55287 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CDH11P55287 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.45□□□□□ -1.86
CDH11P55287 EEF1B2P4-201ENST00000551398 348 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CDH11P55287 AC107954.1-201ENST00000565906 727 ntBASIC3.45□□□□□ -1.86
CDH11P55287 MIR5047-201ENST00000579212 100 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms