Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.47□□□□□ -1.85
VCPP55072 GTF2IP23-201ENST00000423746 351 ntBASIC3.47□□□□□ -1.85
VCPP55072 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.47□□□□□ -1.85
VCPP55072 Z93242.1-201ENST00000427102 353 ntBASIC3.47□□□□□ -1.85
VCPP55072 ISCA1P2-201ENST00000438679 421 ntBASIC3.47□□□□□ -1.85
VCPP55072 HMGB3P11-201ENST00000440127 604 ntBASIC3.47□□□□□ -1.85
VCPP55072 AL358794.1-201ENST00000445689 381 ntBASIC3.47□□□□□ -1.85
VCPP55072 NDUFA5P7-201ENST00000452914 242 ntBASIC3.47□□□□□ -1.85
VCPP55072 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.47□□□□□ -1.85
VCPP55072 AC104164.3-201ENST00000467363 1258 ntBASIC3.47□□□□□ -1.85
VCPP55072 RNA5SP356-201ENST00000515972 94 ntBASIC3.47□□□□□ -1.85
VCPP55072 RNU1-61P-201ENST00000516107 151 ntBASIC3.47□□□□□ -1.85
VCPP55072 SCARNA1-201ENST00000517138 166 ntBASIC3.47□□□□□ -1.85
VCPP55072 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.47□□□□□ -1.85
VCPP55072 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.47□□□□□ -1.85
VCPP55072 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.47□□□□□ -1.85
VCPP55072 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.47□□□□□ -1.85
VCPP55072 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.47□□□□□ -1.85
VCPP55072 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.47□□□□□ -1.85
VCPP55072 AC005951.1-201ENST00000576706 485 ntBASIC3.47□□□□□ -1.85
VCPP55072 MIR5708-201ENST00000579723 85 ntBASIC3.47□□□□□ -1.85
VCPP55072 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.47□□□□□ -1.85
VCPP55072 MIR3162-201ENST00000581818 82 ntBASIC3.47□□□□□ -1.85
VCPP55072 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.47□□□□□ -1.85
VCPP55072 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.47□□□□□ -1.85
VCPP55072 AC123767.1-202ENST00000620407 817 ntBASIC3.47□□□□□ -1.85
VCPP55072 AC098679.5-201ENST00000624394 571 ntBASIC3.47□□□□□ -1.85
VCPP55072 AC073476.4-201ENST00000628409 72 ntBASIC3.47□□□□□ -1.85
VCPP55072 MFSD8-245ENST00000641743 948 ntBASIC3.47□□□□□ -1.85
VCPP55072 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VCPP55072 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.47□□□□□ -1.85
VCPP55072 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
VCPP55072 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.46□□□□□ -1.85
VCPP55072 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
VCPP55072 CR383658.2-201ENST00000547576 1525 ntBASIC3.46□□□□□ -1.86
VCPP55072 DBF4P1-201ENST00000412976 1892 ntBASIC3.46□□□□□ -1.86
VCPP55072 AC093908.1-201ENST00000623125 8092 ntBASIC3.46□□□□□ -1.86
VCPP55072 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.46□□□□□ -1.86
VCPP55072 HMGB1P5-201ENST00000255320 642 ntBASIC3.46□□□□□ -1.86
VCPP55072 RNA5SP258-201ENST00000362750 119 ntBASIC3.46□□□□□ -1.86
VCPP55072 RNVU1-3-201ENST00000364313 161 ntBASIC3.46□□□□□ -1.86
VCPP55072 RPL31P1-201ENST00000398116 372 ntBASIC3.46□□□□□ -1.86
VCPP55072 AL121978.1-201ENST00000402778 359 ntBASIC3.46□□□□□ -1.86
VCPP55072 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.46□□□□□ -1.86
VCPP55072 HMGN1P24-201ENST00000412282 298 ntBASIC3.46□□□□□ -1.86
VCPP55072 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.46□□□□□ -1.86
VCPP55072 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.46□□□□□ -1.86
VCPP55072 BX890604.2-201ENST00000427883 474 ntBASIC3.46□□□□□ -1.86
VCPP55072 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VCPP55072 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.46□□□□□ -1.86
VCPP55072 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.46□□□□□ -1.86
VCPP55072 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.46□□□□□ -1.86
VCPP55072 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.46□□□□□ -1.86
VCPP55072 RPL31P50-201ENST00000471002 296 ntBASIC3.46□□□□□ -1.86
VCPP55072 RN7SL432P-201ENST00000484057 298 ntBASIC3.46□□□□□ -1.86
VCPP55072 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.46□□□□□ -1.86
VCPP55072 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.46□□□□□ -1.86
VCPP55072 AC108078.3-201ENST00000502633 489 ntBASIC3.46□□□□□ -1.86
VCPP55072 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.46□□□□□ -1.86
VCPP55072 APOOP4-201ENST00000513530 597 ntBASIC3.46□□□□□ -1.86
VCPP55072 RNU6-237P-201ENST00000515985 71 ntBASIC3.46□□□□□ -1.86
VCPP55072 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.46□□□□□ -1.86
VCPP55072 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.46□□□□□ -1.86
VCPP55072 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.46□□□□□ -1.86
VCPP55072 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.46□□□□□ -1.86
VCPP55072 XIAPP1-201ENST00000603162 600 ntBASIC3.46□□□□□ -1.86
VCPP55072 AC009237.15-201ENST00000610252 501 ntBASIC3.46□□□□□ -1.86
VCPP55072 PART1_2.1-201ENST00000612397 250 ntBASIC3.46□□□□□ -1.86
VCPP55072 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.46□□□□□ -1.86
VCPP55072 CYCSP41-201ENST00000616920 296 ntBASIC3.46□□□□□ -1.86
VCPP55072 SNORD39.4-201ENST00000620099 78 ntBASIC3.46□□□□□ -1.86
VCPP55072 AL157770.1-201ENST00000623049 439 ntBASIC3.46□□□□□ -1.86
VCPP55072 ZNF663P-202ENST00000641770 1131 ntBASIC3.46□□□□□ -1.86
VCPP55072 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VCPP55072 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.46□□□□□ -1.86
VCPP55072 AC110774.1-201ENST00000623567 2018 ntBASIC3.46□□□□□ -1.86
VCPP55072 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.45□□□□□ -1.86
VCPP55072 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
VCPP55072 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VCPP55072 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.45□□□□□ -1.86
VCPP55072 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.45□□□□□ -1.86
VCPP55072 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VCPP55072 RNU4-51P-201ENST00000364206 140 ntBASIC3.45□□□□□ -1.86
VCPP55072 RNU6-707P-201ENST00000364647 95 ntBASIC3.45□□□□□ -1.86
VCPP55072 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.45□□□□□ -1.86
VCPP55072 RNU6-921P-201ENST00000384361 107 ntBASIC3.45□□□□□ -1.86
VCPP55072 AL133264.1-201ENST00000407157 562 ntBASIC3.45□□□□□ -1.86
VCPP55072 HMGB3P23-201ENST00000414981 585 ntBASIC3.45□□□□□ -1.86
VCPP55072 FCF1P2-201ENST00000415284 583 ntBASIC3.45□□□□□ -1.86
VCPP55072 AC245291.1-201ENST00000419501 328 ntBASIC3.45□□□□□ -1.86
VCPP55072 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.45□□□□□ -1.86
VCPP55072 AC012065.2-201ENST00000421295 375 ntBASIC3.45□□□□□ -1.86
VCPP55072 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.45□□□□□ -1.86
VCPP55072 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.45□□□□□ -1.86
VCPP55072 AL121890.1-201ENST00000435457 205 ntBASIC3.45□□□□□ -1.86
VCPP55072 COX6CP18-201ENST00000448769 222 ntBASIC3.45□□□□□ -1.86
VCPP55072 AC125238.1-201ENST00000448842 249 ntBASIC3.45□□□□□ -1.86
VCPP55072 snoU13.4-201ENST00000458916 104 ntBASIC3.45□□□□□ -1.86
VCPP55072 AC069528.1-202ENST00000482888 637 ntBASIC3.45□□□□□ -1.86
VCPP55072 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms