Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
ATXN1P54253 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATXN1P54253 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
ATXN1P54253 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.59□□□□□ -1.67
ATXN1P54253 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATXN1P54253 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATXN1P54253 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATXN1P54253 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
ATXN1P54253 RNU5F-6P-201ENST00000362979 116 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 SNORA63C-201ENST00000364578 129 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 RNU6-1226P-201ENST00000384317 107 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 RNU6-738P-201ENST00000384531 106 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATXN1P54253 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.59□□□□□ -1.67
ATXN1P54253 RPL31P2-201ENST00000413849 377 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.59□□□□□ -1.67
ATXN1P54253 MTCO3P12-201ENST00000416718 547 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.59□□□□□ -1.67
ATXN1P54253 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.59□□□□□ -1.67
ATXN1P54253 OR8F1P-201ENST00000425243 930 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 RPL7P2-201ENST00000427639 268 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 YME1L1P1-201ENST00000429435 297 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC000111.3-201ENST00000433478 193 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC007389.2-201ENST00000434630 306 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 MTND3P2-201ENST00000438452 342 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 DPPA3P1-201ENST00000448050 469 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.59□□□□□ -1.67
ATXN1P54253 AL590639.1-201ENST00000456484 337 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 SNORA59A-201ENST00000459326 152 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 MEMO1P3-201ENST00000459811 302 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AP000797.1-201ENST00000478870 387 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 RPL9P6-201ENST00000492764 598 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC108145.1-201ENST00000503770 153 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC021678.1-201ENST00000505195 936 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.59□□□□□ -1.67
ATXN1P54253 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.59□□□□□ -1.67
ATXN1P54253 MTND5P4-201ENST00000514978 288 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.59□□□□□ -1.67
ATXN1P54253 MTCO1P24-201ENST00000515438 1558 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 RNU6-150P-201ENST00000516237 95 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.59□□□□□ -1.67
ATXN1P54253 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AP002453.2-201ENST00000533503 320 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.59□□□□□ -1.67
ATXN1P54253 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
ATXN1P54253 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.59□□□□□ -1.67
ATXN1P54253 AL669831.4-202ENST00000590817 238 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC015871.2-201ENST00000603605 948 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.59□□□□□ -1.67
ATXN1P54253 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 U4.5-201ENST00000617137 123 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC068722.2-201ENST00000618734 544 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 AC007546.2-201ENST00000623996 360 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 MTND4LP32-201ENST00000636111 270 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 MIR3688-2-201ENST00000636963 87 ntBASIC4.59□□□□□ -1.67
ATXN1P54253 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.59□□□□□ -1.67
ATXN1P54253 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
ATXN1P54253 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.59□□□□□ -1.68
ATXN1P54253 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
ATXN1P54253 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATXN1P54253 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATXN1P54253 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATXN1P54253 TEX21P-201ENST00000447107 1476 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATXN1P54253 MIR331-201ENST00000362302 94 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 RNA5SP307-201ENST00000362863 116 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 Y_RNA.216-201ENST00000364205 93 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 Y_RNA.263-201ENST00000364659 114 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
ATXN1P54253 RNU6-921P-201ENST00000384361 107 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 MIR649-201ENST00000384843 97 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 RN7SKP56-201ENST00000410513 331 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.58□□□□□ -1.68
ATXN1P54253 RPS27AP14-201ENST00000422868 454 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 ISCA1P1-201ENST00000426679 387 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 RPL23AP25-201ENST00000430973 463 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.58□□□□□ -1.68
ATXN1P54253 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.58□□□□□ -1.68
ATXN1P54253 AC011998.1-201ENST00000433403 117 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.58□□□□□ -1.68
ATXN1P54253 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.58□□□□□ -1.68
ATXN1P54253 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.58□□□□□ -1.68
ATXN1P54253 AL590399.6-201ENST00000446396 307 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 RPL39P6-201ENST00000448289 150 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.58□□□□□ -1.68
ATXN1P54253 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.58□□□□□ -1.68
ATXN1P54253 RPL35AP15-201ENST00000468042 339 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 RPL7P49-201ENST00000471402 708 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.58□□□□□ -1.68
ATXN1P54253 MTCYBP18-201ENST00000501056 747 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.58□□□□□ -1.68
ATXN1P54253 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.58□□□□□ -1.68
ATXN1P54253 AC006499.2-201ENST00000513470 337 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.58□□□□□ -1.68
ATXN1P54253 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.58□□□□□ -1.68
ATXN1P54253 OR6C73P-201ENST00000546432 358 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 AC125611.2-201ENST00000551907 647 ntBASIC4.58□□□□□ -1.68
ATXN1P54253 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms