Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.69□□□□□ -1.82
LIMK1P53667 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
LIMK1P53667 XIAPP1-201ENST00000603162 600 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 MIR7851-201ENST00000610611 160 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK1P53667 AC004009.2-201ENST00000623016 728 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.69□□□□□ -1.82
LIMK1P53667 SNORA50A-202ENST00000629536 136 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC008993.2-201ENST00000631744 806 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK1P53667 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.69□□□□□ -1.82
LIMK1P53667 OR6C71P-202ENST00000641886 1107 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
LIMK1P53667 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK1P53667 AC110774.1-201ENST00000623567 2018 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 IPO8P1-201ENST00000455509 3109 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 UBE3AP2-201ENST00000429033 2259 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 AC244517.1-201ENST00000606030 2086 ntBASIC3.69□□□□□ -1.82
LIMK1P53667 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK1P53667 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK1P53667 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK1P53667 RNU4-28P-201ENST00000364739 141 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK1P53667 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK1P53667 DHFRP6-201ENST00000401776 268 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.68□□□□□ -1.82
LIMK1P53667 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.68□□□□□ -1.82
LIMK1P53667 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.68□□□□□ -1.82
LIMK1P53667 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.68□□□□□ -1.82
LIMK1P53667 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 RPL21P10-201ENST00000463521 490 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 ST13P14-201ENST00000474095 734 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 RN7SKP287-201ENST00000516546 266 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.68□□□□□ -1.82
LIMK1P53667 RANP9-201ENST00000519957 271 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 HSPA8P13-201ENST00000523715 472 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.68□□□□□ -1.82
LIMK1P53667 AC011611.1-201ENST00000552179 197 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.68□□□□□ -1.82
LIMK1P53667 AC087465.1-201ENST00000560574 245 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.68□□□□□ -1.82
LIMK1P53667 MIR4325-201ENST00000583049 90 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK1P53667 AC093424.1-201ENST00000604999 338 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 AC025588.4-201ENST00000615802 908 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 AC068831.7-201ENST00000616954 363 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 AP000770.2-201ENST00000623694 100 ntBASIC3.68□□□□□ -1.82
LIMK1P53667 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK1P53667 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
LIMK1P53667 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK1P53667 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK1P53667 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIMK1P53667 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.67□□□□□ -1.82
LIMK1P53667 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.67□□□□□ -1.82
LIMK1P53667 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.67□□□□□ -1.82
LIMK1P53667 RPL23AP29-201ENST00000397284 453 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 EI24P2-201ENST00000397776 1076 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AC109780.2-201ENST00000413467 845 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AC092447.6-201ENST00000414578 210 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMK1P53667 AC010099.3-201ENST00000423896 409 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AL590233.1-201ENST00000430017 456 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 KCTD9P3-201ENST00000434597 1169 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMK1P53667 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.67□□□□□ -1.82
LIMK1P53667 MTND2P19-201ENST00000449129 1012 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.67□□□□□ -1.82
LIMK1P53667 ANKRD26P4-201ENST00000455755 950 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMK1P53667 SUMO2P2-201ENST00000456482 255 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.67□□□□□ -1.82
LIMK1P53667 AC023424.2-201ENST00000493479 777 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 RNU2-27P-201ENST00000516185 142 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AC023050.2-201ENST00000544968 387 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.67□□□□□ -1.82
LIMK1P53667 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.67□□□□□ -1.82
LIMK1P53667 AC087481.2-201ENST00000565492 330 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMK1P53667 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMK1P53667 AC006539.2-201ENST00000601729 572 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AL031281.1-201ENST00000604049 488 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AL592221.1-201ENST00000605266 382 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AC116312.1-201ENST00000606841 314 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMK1P53667 AC087683.2-201ENST00000611384 326 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 AL360181.4-201ENST00000621752 134 ntBASIC3.67□□□□□ -1.82
LIMK1P53667 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LIMK1P53667 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMK1P53667 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIMK1P53667 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIMK1P53667 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms