Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.53□□□□□ -1.84
PDX1P52945 MIR5186-201ENST00000577504 120 ntBASIC3.53□□□□□ -1.84
PDX1P52945 MIR3915-201ENST00000578518 97 ntBASIC3.53□□□□□ -1.84
PDX1P52945 Z99497.2-201ENST00000603634 310 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC010591.1-201ENST00000603941 649 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC121247.2-201ENST00000604776 136 ntBASIC3.53□□□□□ -1.84
PDX1P52945 U73479.1-201ENST00000618062 168 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AL356266.1-201ENST00000623311 483 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC007494.3-201ENST00000624660 743 ntBASIC3.53□□□□□ -1.84
PDX1P52945 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.53□□□□□ -1.84
PDX1P52945 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.53□□□□□ -1.84
PDX1P52945 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDX1P52945 AC012321.1-201ENST00000561622 1588 ntBASIC3.53□□□□□ -1.84
PDX1P52945 AC006504.1-201ENST00000562493 3666 ntBASIC3.53□□□□□ -1.84
PDX1P52945 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDX1P52945 AL136964.1-201ENST00000622038 2990 ntBASIC3.53□□□□□ -1.84
PDX1P52945 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDX1P52945 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.53□□□□□ -1.84
PDX1P52945 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDX1P52945 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDX1P52945 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDX1P52945 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
PDX1P52945 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.52□□□□□ -1.85
PDX1P52945 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDX1P52945 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDX1P52945 RNU1-18P-201ENST00000363062 164 ntBASIC3.52□□□□□ -1.85
PDX1P52945 RNU1-33P-201ENST00000364249 162 ntBASIC3.52□□□□□ -1.85
PDX1P52945 HSPE1P8-201ENST00000406997 288 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC092447.6-201ENST00000414578 210 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.52□□□□□ -1.85
PDX1P52945 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.52□□□□□ -1.85
PDX1P52945 AC006548.1-201ENST00000427470 102 ntBASIC3.52□□□□□ -1.85
PDX1P52945 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 FTH1P6-201ENST00000430768 320 ntBASIC3.52□□□□□ -1.85
PDX1P52945 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.52□□□□□ -1.85
PDX1P52945 LARP1BP3-201ENST00000437229 869 ntBASIC3.52□□□□□ -1.85
PDX1P52945 MUPP-201ENST00000438111 566 ntBASIC3.52□□□□□ -1.85
PDX1P52945 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.52□□□□□ -1.85
PDX1P52945 HSPE1P28-201ENST00000443139 211 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDX1P52945 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.52□□□□□ -1.85
PDX1P52945 AL645939.1-201ENST00000453429 797 ntBASIC3.52□□□□□ -1.85
PDX1P52945 SUMO2P2-201ENST00000456482 255 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AP001992.1-205ENST00000462248 379 ntBASIC3.52□□□□□ -1.85
PDX1P52945 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
PDX1P52945 SETP11-201ENST00000473027 690 ntBASIC3.52□□□□□ -1.85
PDX1P52945 SYPL1P1-201ENST00000473622 768 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC106872.2-201ENST00000494303 480 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC012170.1-201ENST00000495139 359 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
PDX1P52945 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.52□□□□□ -1.85
PDX1P52945 NARSP2-201ENST00000518524 679 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.52□□□□□ -1.85
PDX1P52945 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.52□□□□□ -1.85
PDX1P52945 AC103843.2-201ENST00000530523 682 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.52□□□□□ -1.85
PDX1P52945 EEF1B2P4-201ENST00000551398 348 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.52□□□□□ -1.85
PDX1P52945 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.52□□□□□ -1.85
PDX1P52945 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC011471.1-201ENST00000585766 187 ntBASIC3.52□□□□□ -1.85
PDX1P52945 WISP1-OT1-201ENST00000602893 642 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AC013444.2-201ENST00000603317 787 ntBASIC3.52□□□□□ -1.85
PDX1P52945 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.52□□□□□ -1.85
PDX1P52945 CR381572.1-201ENST00000625098 102 ntBASIC3.52□□□□□ -1.85
PDX1P52945 AP000553.6-201ENST00000641242 118 ntBASIC3.52□□□□□ -1.85
PDX1P52945 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDX1P52945 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDX1P52945 AL356473.1-201ENST00000406203 1408 ntBASIC3.52□□□□□ -1.85
PDX1P52945 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDX1P52945 AC097714.1-201ENST00000511272 1647 ntBASIC3.52□□□□□ -1.85
PDX1P52945 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDX1P52945 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDX1P52945 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.51□□□□□ -1.85
PDX1P52945 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.51□□□□□ -1.85
PDX1P52945 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.51□□□□□ -1.85
PDX1P52945 RNU5A-2P-201ENST00000384337 116 ntBASIC3.51□□□□□ -1.85
PDX1P52945 Y_RNA.548-201ENST00000384656 105 ntBASIC3.51□□□□□ -1.85
PDX1P52945 RNA5SP424-201ENST00000390988 115 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AL021407.1-201ENST00000404531 386 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AL138878.1-201ENST00000405131 347 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AL583834.1-201ENST00000406943 343 ntBASIC3.51□□□□□ -1.85
PDX1P52945 RN7SKP177-201ENST00000410567 355 ntBASIC3.51□□□□□ -1.85
PDX1P52945 RNU6-920P-201ENST00000410926 92 ntBASIC3.51□□□□□ -1.85
PDX1P52945 Z92545.1-201ENST00000411782 234 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.51□□□□□ -1.85
PDX1P52945 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.51□□□□□ -1.85
PDX1P52945 RPL23AP39-201ENST00000415533 405 ntBASIC3.51□□□□□ -1.85
PDX1P52945 MTATP6P27-201ENST00000416987 621 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AC090960.1-201ENST00000421072 306 ntBASIC3.51□□□□□ -1.85
PDX1P52945 AL513174.1-201ENST00000423182 629 ntBASIC3.51□□□□□ -1.85
PDX1P52945 ATP5JP1-201ENST00000431631 322 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms