Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL356967.1-201ENST00000406305 431 ntBASIC4.32□□□□□ -1.72
NEK3P51956 RNA5SP36-201ENST00000410197 133 ntBASIC4.32□□□□□ -1.72
NEK3P51956 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.32□□□□□ -1.72
NEK3P51956 BX890604.2-201ENST00000427883 474 ntBASIC4.32□□□□□ -1.72
NEK3P51956 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.32□□□□□ -1.72
NEK3P51956 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEK3P51956 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.32□□□□□ -1.72
NEK3P51956 AC092641.1-201ENST00000440229 772 ntBASIC4.32□□□□□ -1.72
NEK3P51956 ST13P20-201ENST00000447996 1065 ntBASIC4.32□□□□□ -1.72
NEK3P51956 AC135721.1-201ENST00000497954 479 ntBASIC4.32□□□□□ -1.72
NEK3P51956 MTCO1P35-201ENST00000515270 228 ntBASIC4.32□□□□□ -1.72
NEK3P51956 RNA5SP519-201ENST00000516480 119 ntBASIC4.32□□□□□ -1.72
NEK3P51956 IGKV2D-23-201ENST00000518179 286 ntBASIC4.32□□□□□ -1.72
NEK3P51956 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.32□□□□□ -1.72
NEK3P51956 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.32□□□□□ -1.72
NEK3P51956 AP000873.5-201ENST00000533906 236 ntBASIC4.32□□□□□ -1.72
NEK3P51956 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.32□□□□□ -1.72
NEK3P51956 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.32□□□□□ -1.72
NEK3P51956 AL109766.1-201ENST00000555080 552 ntBASIC4.32□□□□□ -1.72
NEK3P51956 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.32□□□□□ -1.72
NEK3P51956 AC012414.6-201ENST00000568241 401 ntBASIC4.32□□□□□ -1.72
NEK3P51956 AC005771.1-201ENST00000585581 349 ntBASIC4.32□□□□□ -1.72
NEK3P51956 BNIP3P8-201ENST00000597863 560 ntBASIC4.32□□□□□ -1.72
NEK3P51956 BDH2P1-201ENST00000602288 736 ntBASIC4.32□□□□□ -1.72
NEK3P51956 AC087752.4-201ENST00000605911 462 ntBASIC4.32□□□□□ -1.72
NEK3P51956 AP002826.1-201ENST00000608835 315 ntBASIC4.32□□□□□ -1.72
NEK3P51956 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.32□□□□□ -1.72
NEK3P51956 AC090970.3-201ENST00000612566 866 ntBASIC4.32□□□□□ -1.72
NEK3P51956 AC068831.8-201ENST00000620171 435 ntBASIC4.32□□□□□ -1.72
NEK3P51956 MIR8059-201ENST00000620427 81 ntBASIC4.32□□□□□ -1.72
NEK3P51956 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEK3P51956 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.32□□□□□ -1.72
NEK3P51956 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEK3P51956 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEK3P51956 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.31□□□□□ -1.72
NEK3P51956 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.31□□□□□ -1.72
NEK3P51956 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEK3P51956 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NEK3P51956 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.31□□□□□ -1.72
NEK3P51956 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
NEK3P51956 RBMY1KP-201ENST00000423480 476 ntBASIC4.31□□□□□ -1.72
NEK3P51956 BTF3P10-201ENST00000433415 495 ntBASIC4.31□□□□□ -1.72
NEK3P51956 MTND1P28-201ENST00000435623 950 ntBASIC4.31□□□□□ -1.72
NEK3P51956 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.31□□□□□ -1.72
NEK3P51956 FTH1P1-201ENST00000437933 532 ntBASIC4.31□□□□□ -1.72
NEK3P51956 RPL23AP89-201ENST00000439324 255 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC114755.5-201ENST00000447760 831 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AL162389.1-201ENST00000449233 177 ntBASIC4.31□□□□□ -1.72
NEK3P51956 PDSS1P2-201ENST00000449397 678 ntBASIC4.31□□□□□ -1.72
NEK3P51956 RPS11P1-201ENST00000451072 473 ntBASIC4.31□□□□□ -1.72
NEK3P51956 HMGB3P22-202ENST00000451823 572 ntBASIC4.31□□□□□ -1.72
NEK3P51956 SSXP1-201ENST00000453640 473 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC099563.1-201ENST00000456086 418 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.31□□□□□ -1.72
NEK3P51956 HMGN2P16-201ENST00000456802 261 ntBASIC4.31□□□□□ -1.72
NEK3P51956 snoU109.1-201ENST00000459339 135 ntBASIC4.31□□□□□ -1.72
NEK3P51956 RPL9P32-201ENST00000464118 620 ntBASIC4.31□□□□□ -1.72
NEK3P51956 MTND4LP3-201ENST00000468320 276 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.31□□□□□ -1.72
NEK3P51956 AC006517.1-201ENST00000480485 328 ntBASIC4.31□□□□□ -1.72
NEK3P51956 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NEK3P51956 AC091965.2-201ENST00000512324 613 ntBASIC4.31□□□□□ -1.72
NEK3P51956 RN7SKP289-201ENST00000517244 295 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AP003467.2-201ENST00000520175 319 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC022616.6-201ENST00000520479 119 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.31□□□□□ -1.72
NEK3P51956 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NEK3P51956 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.31□□□□□ -1.72
NEK3P51956 AL133271.1-201ENST00000538229 291 ntBASIC4.31□□□□□ -1.72
NEK3P51956 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.31□□□□□ -1.72
NEK3P51956 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.31□□□□□ -1.72
NEK3P51956 AC125611.2-201ENST00000551907 647 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.31□□□□□ -1.72
NEK3P51956 AC025884.1-201ENST00000556034 378 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AL133153.1-201ENST00000557756 303 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AP001029.3-201ENST00000588063 596 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.31□□□□□ -1.72
NEK3P51956 AC073544.2-201ENST00000601155 540 ntBASIC4.31□□□□□ -1.72
NEK3P51956 KC877982.1-201ENST00000602313 470 ntBASIC4.31□□□□□ -1.72
NEK3P51956 RNU6-87P-201ENST00000607561 108 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC245008.1-201ENST00000608123 476 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC004067.1-201ENST00000608733 700 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC103710.1-201ENST00000610003 901 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC012531.5-201ENST00000611375 151 ntBASIC4.31□□□□□ -1.72
NEK3P51956 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.31□□□□□ -1.72
NEK3P51956 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AL445363.3-201ENST00000623080 671 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC112204.3-201ENST00000623822 332 ntBASIC4.31□□□□□ -1.72
NEK3P51956 AC068724.3-201ENST00000625906 87 ntBASIC4.31□□□□□ -1.72
NEK3P51956 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NEK3P51956 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.31□□□□□ -1.72
NEK3P51956 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.31□□□□□ -1.72
NEK3P51956 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEK3P51956 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEK3P51956 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEK3P51956 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NEK3P51956 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEK3P51956 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.31□□□□□ -1.72
NEK3P51956 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NEK3P51956 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms